Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_O24
(652 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex su... 99 6e-22
SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like |Schizosacch... 97 2e-21
SPCC550.03c |||RNA helicase involved in mRNA catabolism|Schizosa... 65 7e-12
SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|c... 36 0.007
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 29 0.58
SPAC23C4.03 |||haspin related kinase|Schizosaccharomyces pombe|c... 29 0.77
SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces po... 27 1.8
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 2.3
SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|... 27 3.1
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 3.1
SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr... 27 3.1
SPBC19C7.09c |uve1|uvde|endonuclease Uve1 |Schizosaccharomyces p... 27 3.1
SPAC29E6.09 ||SPAC30.13|sequence orphan|Schizosaccharomyces pomb... 27 3.1
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 26 4.1
SPAC664.05 |rpl13||60S ribosomal protein L13|Schizosaccharomyces... 26 4.1
SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1 |S... 26 4.1
SPAC6C3.07 |mug68||sequence orphan|Schizosaccharomyces pombe|chr... 26 4.1
SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit Swi2|Schizo... 26 5.4
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 26 5.4
SPAC17G8.13c |mst2||histone acetyltransferase Mst2|Schizosacchar... 25 7.2
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 25 7.2
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 25 7.2
SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces ... 25 7.2
SPBC582.04c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 9.5
SPBC16G5.02c |||ribokinase |Schizosaccharomyces pombe|chr 2|||Ma... 25 9.5
SPAC8C9.14 |prr1||transcription factor Prr1|Schizosaccharomyces ... 25 9.5
>SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex
subunit Mtr4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1117
Score = 98.7 bits (235), Expect = 6e-22
Identities = 48/86 (55%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Frame = +1
Query: 400 LETHEGCTHEVAIPPNQEYAPLLPLTTE--PVKQYSFILDPFQKEAILCIDNLQSVLVSA 573
+E H+V+IPPN +Y P+ + P + Y F LDPFQ +I CI+ +SVLVSA
Sbjct: 161 VELRHQVRHQVSIPPNYDYVPISKHKSPIPPARTYPFTLDPFQAVSIACIERQESVLVSA 220
Query: 574 HTSAGKTVVAEYAIALSLKNKQRVIY 651
HTSAGKTVVAEYA+A SL++KQRVIY
Sbjct: 221 HTSAGKTVVAEYAVAQSLRDKQRVIY 246
>SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1030
Score = 97.1 bits (231), Expect = 2e-21
Identities = 47/79 (59%), Positives = 60/79 (75%), Gaps = 3/79 (3%)
Frame = +1
Query: 424 HEVAIPPNQEYAPL---LPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKT 594
H+V +P + +Y PL +P + P K Y F LDPFQ AI C++ ++SVLVSAHTSAGKT
Sbjct: 96 HKVVVPDDYDYIPLNKHIP-SDPPAKTYPFELDPFQSTAIKCVERMESVLVSAHTSAGKT 154
Query: 595 VVAEYAIALSLKNKQRVIY 651
V+AEYAIA +LKN+QRVIY
Sbjct: 155 VIAEYAIAQALKNRQRVIY 173
>SPCC550.03c |||RNA helicase involved in mRNA
catabolism|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1213
Score = 65.3 bits (152), Expect = 7e-12
Identities = 37/85 (43%), Positives = 48/85 (56%)
Frame = +1
Query: 397 TLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAH 576
TL H+ + + + L E + F LD FQKEAI ++ SV V+AH
Sbjct: 244 TLNLHKQPDYAHVVDSSAPIENFQQLVPEMALDFPFELDNFQKEAIYHLEMGDSVFVAAH 303
Query: 577 TSAGKTVVAEYAIALSLKNKQRVIY 651
TSAGKTVVAEYAIAL+ K+ + IY
Sbjct: 304 TSAGKTVVAEYAIALAQKHMTKAIY 328
>SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1717
Score = 35.5 bits (78), Expect = 0.007
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +1
Query: 484 PVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKN 633
P + +F D +Q+E + +D +SV V A TS+GKT ++ YA+ L++
Sbjct: 728 PDSRVAFDPDEWQRETLDILDRDESVFVVAPTSSGKTFISFYAMEKVLRD 777
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 29.1 bits (62), Expect = 0.58
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 148 DINSLFDCFDETPITEAAIQLPNVKNVEKPNLE 246
DINS+ D D+T +TE LPN ++ P LE
Sbjct: 1201 DINSVMDALDKTYMTEVIQNLPN--GLDTPLLE 1231
>SPAC23C4.03 |||haspin related kinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 488
Score = 28.7 bits (61), Expect = 0.77
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 277 HDDIQYADTSVSKKPREEEEDSELITDINVDLLQS 381
H D+ + + + K R EEE S L+ +I++D ++S
Sbjct: 303 HRDLHWGNILIRKADRSEEEVSFLLNEISLDDIES 337
>SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 949
Score = 27.5 bits (58), Expect = 1.8
Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Frame = +1
Query: 139 KMSDINSLFDCFDETPITE--AAIQLPNVKNVEKPNLEELTAAGNKRAHD--DIQYADTS 306
K++++N + D + +E A QL +K V + LE++ + K + D D ++ + +
Sbjct: 268 KLTEVNVMCDRHMDAISSEELACHQLTQLKKVVQ-TLEDIYSEHKKVSEDVKDQRFLE-A 325
Query: 307 VSKKPREEEEDSELITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEP 486
++ + + T++NVDLL V E H+ H V+ Q+++ L T
Sbjct: 326 INGINSIVTQLKKKSTELNVDLLSLPSVKSLREEHKVLYHTVSQSVVQQFSKFL---TSD 382
Query: 487 VKQYSFILD 513
+ ++S ILD
Sbjct: 383 MHKFSTILD 391
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.1 bits (57), Expect = 2.3
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Frame = +1
Query: 490 KQYSFILDPFQKEAIL-----CIDNLQSVLVSAHTSAGKTVVAEY 609
+Q +I+ PF ++ +L C + +L+ TS+GKT + EY
Sbjct: 869 EQEHYIITPFVQKNLLNIARACSTRMFPILIQGPTSSGKTSMIEY 913
>SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|chr
2|||Manual
Length = 643
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 238 NLEELTAAGNKRAHDDIQYADTSVSKKPREEEEDSELITDINVDLL 375
N E T +K+ + S KP +EDSEL D+ + +L
Sbjct: 250 NKSEQTIKPSKQNKQKEEKKTISQGNKPNSRDEDSELSIDVPLSML 295
>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 439 PPNQEYAPLLPLTTEPVKQYSF 504
PP +EY+P + L T PV + S+
Sbjct: 217 PPIEEYSPSVSLPTSPVAEESY 238
>SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1471
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 553 QSVLVSAHTSAGKTVVAEY 609
Q+++VS + AGKTV A+Y
Sbjct: 153 QTIIVSGESGAGKTVAAKY 171
>SPBC19C7.09c |uve1|uvde|endonuclease Uve1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 26.6 bits (56), Expect = 3.1
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = +1
Query: 58 CTLKSKLIN**MECTKSILKIC-KVTXFKMSDINSLFDCFD-ETPITEAAIQLPNVKNVE 231
CT+ + + KS+L + K T + +N + F ETP+ + N+
Sbjct: 36 CTITYSRFHCLPDTLKSLLPMSSKTTLSMLPQVNIGANSFSAETPVDLKKENETELANIS 95
Query: 232 KPNLEELTAAGNKRAHDDIQYADTSVSKK 318
P+ + + + KRA + A SVS K
Sbjct: 96 GPHKKSTSTSTRKRARSSKKKATDSVSDK 124
>SPAC29E6.09 ||SPAC30.13|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 339
Score = 26.6 bits (56), Expect = 3.1
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Frame = +1
Query: 205 QLPNV--KNVE-KPNLEELTA--AGNKRAHDDIQYADTSVSKKPREEEEDSELITDINVD 369
+LP V K E + L LT+ NKR ++D + D + +K E++ D NV+
Sbjct: 4 ELPEVIFKGTEFEEQLSNLTSDSQANKRVYEDYDFKDETSAKPIPTEKKLKVFKKDDNVE 63
Query: 370 LLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLL 468
L S + I ++ + + IP Q+ +L
Sbjct: 64 TLLSALEIQNEKSKQQVEYSF-IPLKQDDGDIL 95
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 514 PFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKN 633
P Q+EAI + N + V+ A T +GKT + L N
Sbjct: 71 PIQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPVIQELWN 110
>SPAC664.05 |rpl13||60S ribosomal protein L13|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 208
Score = 26.2 bits (55), Expect = 4.1
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +1
Query: 184 PITEAAIQLPNVKNVEKPNLEELTAAGNKRAHDDIQYADTSVSKKPREEEE 336
PIT+ A++ E N + N+RA+ A + KK EE E
Sbjct: 154 PITQEAVEEAKPITEEAKNFNAFSTLSNERAYARYAGARAAFQKKRAEEAE 204
>SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 4.1
Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 3/140 (2%)
Frame = +1
Query: 139 KMSDINSLFDCFDETPITEAAIQL--PNVKNVEKPNLEELTAAGNKRAHDDIQYADTSVS 312
+ ++ S D ET E+++ V+ ++ N+E+ + + VS
Sbjct: 71 RKEELESHVDSEIETSKDESSVNKVEEKVEEFKEDNVEQEIKQKRSLSESPQESMLEKVS 130
Query: 313 KKPREEEEDSELITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEY-APLLPLTTEPV 489
KKP+ E +E I+ NV+ +++ + + E T V N LL +
Sbjct: 131 KKPKVSEAHNEEISPENVETIENELDLPVKGKDEQTTGLVYKNANDLLTGSLLSFIVDDS 190
Query: 490 KQYSFILDPFQKEAILCIDN 549
Y QK+ +LC+D+
Sbjct: 191 FSYE------QKKKLLCVDS 204
>SPAC6C3.07 |mug68||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 515
Score = 26.2 bits (55), Expect = 4.1
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 112 LKICKVTXFKMSDINSLFDCFDETPITEAAIQLPNVKNVEKPNLE-ELTAAGNKR 273
L C + +++++ + + ++ PIT+ A + N+KN++ NLE + NKR
Sbjct: 289 LNSCTMENHEINELTAT-NKMNDGPITKCARETINIKNLKTSNLERNQNSPKNKR 342
>SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit
Swi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 25.8 bits (54), Expect = 5.4
Identities = 15/68 (22%), Positives = 29/68 (42%)
Frame = +1
Query: 313 KKPREEEEDSELITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVK 492
KKPR+ + + I + + H ++ + GC+ E P++E LT++
Sbjct: 265 KKPRKVFDAVVIPVTIKPSIYTEPSLPHHIDWNNGCSEEFDFEPSREDEDFPDLTSDSTG 324
Query: 493 QYSFILDP 516
Q +P
Sbjct: 325 QDPLSSEP 332
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 25.8 bits (54), Expect = 5.4
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -2
Query: 228 NIFNIWQLNRSFSYWCF 178
N++ W++NR WC+
Sbjct: 993 NVYTTWKMNRCSDNWCY 1009
>SPAC17G8.13c |mst2||histone acetyltransferase
Mst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 407
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/39 (25%), Positives = 24/39 (61%)
Frame = -1
Query: 625 VIELWHTQQPLFCQQTCELIQVQIVNYLYTILLLFETDP 509
+ E+ +QP++CQ C L ++ +L++ +L ++ +P
Sbjct: 172 IFEVDGQRQPIYCQNLCLLAKM----FLHSKMLYYDVEP 206
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 391 IHTLETHEGCTHEVAIPPNQEYAPLLPLTT 480
+HTLE HE +++ P++E P+L T+
Sbjct: 318 LHTLEGHEDIVTKISFSPHEE--PILASTS 345
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 25.4 bits (53), Expect = 7.2
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = +1
Query: 223 NVEKPNLEELTAAGNKRAHDDIQYADTSVSKKPREEEEDSELITDINVDLLQSRIVI 393
N ++ L++L A ++ + + + S EE+ D EL+T VD R+++
Sbjct: 72 NKKREELQKLEAKYGEQMANGVDGEGSDESSSEEEEDSDGELVTP-EVDAAILRMIV 127
>SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 511
Score = 25.4 bits (53), Expect = 7.2
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 166 DCFDETPITEAAIQLPNVKNVEKPNLEELTAAGNKRAHDDIQYADTSVSKKPREEEEDSE 345
D F +EAA + +KN+ N +E + N+ DDI S ++ R EE S+
Sbjct: 342 DTFSALRYSEAARR---IKNISNINCKEAYSTNNEGELDDILTTLESDREQLRRHEEHSQ 398
>SPBC582.04c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 601
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 112 LKICKVTXFKMSDINS-LFDCFDETPITEAAIQLPNVKNVE 231
+K+C V S LF+ F + PIT ++ N K V+
Sbjct: 364 VKVCHVLKELRSPTGEKLFESFSDDPITAVHFEVMNCKGVQ 404
>SPBC16G5.02c |||ribokinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 318
Score = 25.0 bits (52), Expect = 9.5
Identities = 16/70 (22%), Positives = 32/70 (45%)
Frame = +1
Query: 349 ITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKE 528
I+ N+ ++Q I + +E H+ + AP +PL+ + + Y L P + E
Sbjct: 135 ISTCNLLIMQLEIPLEAVEIALQIAHKHGVDVLMNPAPAIPLSHDMI-SYCAYLVPNEHE 193
Query: 529 AILCIDNLQS 558
A + ++ S
Sbjct: 194 AAILLNQADS 203
>SPAC8C9.14 |prr1||transcription factor Prr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 539
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 162 QTIYVRHFKXGNFADF 115
+TI RHFK NFA F
Sbjct: 46 KTILPRHFKHSNFASF 61
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,489,441
Number of Sequences: 5004
Number of extensions: 50409
Number of successful extensions: 189
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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