Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_O24
(652 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0490 - 3782195-3782305,3782929-3783021,3783199-3783294,378... 81 6e-16
02_01_0451 - 3237849-3238061,3238142-3238268,3238418-3238656,323... 66 3e-11
02_05_0685 + 30891289-30891810,30892740-30892915,30893379-308934... 43 2e-04
12_01_1023 + 10458092-10458397,10459126-10459254,10459335-104595... 40 0.002
02_01_0055 + 410661-411380,411481-413733,414486-414875,414983-41... 34 0.11
08_02_1517 + 27642361-27643218 33 0.26
03_05_1091 + 30322035-30322739,30322861-30324043,30324114-303251... 32 0.34
05_07_0331 - 29324967-29326256,29326919-29327020,29327226-293272... 31 0.60
09_02_0212 + 5820866-5821031,5821172-5821224,5821512-5821639,582... 31 0.80
01_01_1165 - 9267891-9268145,9268395-9268510,9268991-9269127,926... 29 4.2
11_01_0805 - 7166265-7166759 28 7.4
01_06_0765 - 31808775-31809443,31809547-31809703,31809777-318098... 27 9.8
>11_01_0490 -
3782195-3782305,3782929-3783021,3783199-3783294,
3783373-3783521,3783886-3784039,3784110-3784205,
3784290-3784379,3784856-3785014,3785150-3785371,
3785552-3785668,3785753-3785824,3786768-3786836,
3786947-3787051,3787248-3787562,3787814-3788809
Length = 947
Score = 81.4 bits (192), Expect = 6e-16
Identities = 45/87 (51%), Positives = 58/87 (66%), Gaps = 9/87 (10%)
Frame = +1
Query: 418 CTHEVAIPPN----QEYAPLLPLTT-----EPVKQYSFILDPFQKEAILCIDNLQSVLVS 570
C HEVA+P ++ A L++ E K Y F LDPFQ +I C++ +SVLVS
Sbjct: 45 CIHEVAVPKGYAAAKDEAVHGTLSSPAFHGEMAKAYPFQLDPFQSVSIACLERNESVLVS 104
Query: 571 AHTSAGKTVVAEYAIALSLKNKQRVIY 651
AHTSAGKT +AEYAIA+S ++KQRVIY
Sbjct: 105 AHTSAGKTAIAEYAIAMSFRDKQRVIY 131
>02_01_0451 -
3237849-3238061,3238142-3238268,3238418-3238656,
3238937-3239151,3239569-3240031,3240562-3240715,
3241724-3241833,3242540-3242797,3242843-3242854,
3243492-3243545,3244202-3244312,3244390-3244545,
3244798-3245201,3245405-3245501,3246041-3246050,
3246097-3246164,3246652-3246762,3246874-3247074,
3247384-3247485,3247980-3248087,3248209-3248411,
3248563-3248680,3248774-3248854,3248958-3249500,
3249602-3249730
Length = 1428
Score = 65.7 bits (153), Expect = 3e-11
Identities = 32/53 (60%), Positives = 39/53 (73%)
Frame = +1
Query: 493 QYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIY 651
+Y F LD FQKEAI + +SV V+AHTSAGKTVVAEYA AL+ K+ R +Y
Sbjct: 383 EYPFELDKFQKEAIYYLQKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVY 435
>02_05_0685 +
30891289-30891810,30892740-30892915,30893379-30893492,
30893846-30893954,30894038-30894124,30895137-30895736,
30895823-30896101,30896808-30896897,30897151-30897507,
30897924-30898160,30898733-30898953,30899856-30899955,
30900042-30900188,30900287-30900385
Length = 1045
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +1
Query: 496 YSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIY 651
Y F +D FQ+ AI SV+VSA TS+GKT++AE A ++ +R+ Y
Sbjct: 166 YDFPIDKFQRLAIQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARGRRLFY 217
>12_01_1023 +
10458092-10458397,10459126-10459254,10459335-10459553,
10459649-10459987,10460095-10460199,10460697-10460807,
10461438-10461688,10462023-10462146,10462440-10462716,
10463212-10463357,10463449-10463598,10463678-10463910,
10464246-10464375,10464406-10464510,10464636-10464914
Length = 967
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 11/60 (18%)
Frame = +1
Query: 418 CTHEVAIPPNQEYAPLLPLT-----------TEPVKQYSFILDPFQKEAILCIDNLQSVL 564
C H+V+ P + Y P P T P K + F LDPFQ EAI C+DN +SV+
Sbjct: 45 CVHDVSYP--EGYDPSAPATHLLNGVGGAEGAGPAKTFPFQLDPFQAEAIRCLDNGESVM 102
>02_01_0055 + 410661-411380,411481-413733,414486-414875,414983-418153
Length = 2177
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 511 DPFQKEAILCIDNLQ-SVLVSAHTSAGKTVVAEYAIALSLKNKQRVI 648
+P Q + + N SVLV+A T +GKT+ AE+AI L+N Q+ +
Sbjct: 1363 NPIQTQVFTVLYNTDDSVLVAAPTGSGKTICAEFAI---LRNHQKAV 1406
>08_02_1517 + 27642361-27643218
Length = 285
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +2
Query: 206 SCQMLKMLKNQTWKS*LLLEISVHMMTSSTLIPLYQK-SLAKK 331
SC+++K+L + +LEIS H+++ T++P Y K SL K
Sbjct: 195 SCRVVKLLAEARETAFSMLEISSHLLSKQTVMPSYSKWSLVSK 237
>03_05_1091 + 30322035-30322739,30322861-30324043,30324114-30325105,
30326409-30326798,30326896-30330060
Length = 2144
Score = 32.3 bits (70), Expect = 0.34
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 511 DPFQKEAILCIDNLQ-SVLVSAHTSAGKTVVAEYAIALSLKNKQRVI 648
+P Q + N SVLV+A T +GKT+ AE+AI L+N Q+ +
Sbjct: 1332 NPIQTQVFTASYNSDDSVLVAAPTGSGKTICAEFAI---LRNHQKAV 1375
>05_07_0331 -
29324967-29326256,29326919-29327020,29327226-29327278,
29327628-29327674,29327762-29327841,29327933-29328016,
29328383-29328433,29328925-29329050,29329231-29329347,
29329710-29329851,29329986-29330053,29330509-29330608,
29330713-29330840,29330929-29330997,29331083-29331205
Length = 859
Score = 31.5 bits (68), Expect = 0.60
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -2
Query: 207 LNRSFSYWCFIKTVKQTIYVRHFKXGNFADFQY*FSTF 94
+ S WC+ + TIYVRH K NF Y FS++
Sbjct: 277 MRASLLQWCYASYSENTIYVRHAKVQNFV-LLYVFSSW 313
>09_02_0212 +
5820866-5821031,5821172-5821224,5821512-5821639,
5821728-5821833,5821998-5822132,5822211-5822262,
5822383-5822447,5823984-5824090,5824596-5824792,
5825145-5825260,5825368-5825453,5825525-5825597,
5826886-5826977,5827069-5827207,5827275-5827369,
5827804-5827978,5828345-5828491
Length = 643
Score = 31.1 bits (67), Expect = 0.80
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 289 QYADTSVSKKPREEEEDSELITDINVDLLQSRIVIHTLETH-EGCTHEVAIPPNQEYAPL 465
+ AD S K+PR ++ED EL+ +N + + L H E +E+A+ EYA
Sbjct: 552 EIADESPPKRPRYDKEDEELLEKVNSEEVTEMTFRDCLTQHVEQVDYEMAL----EYAMQ 607
Query: 466 LPLTTEP 486
++ EP
Sbjct: 608 SGVSEEP 614
>01_01_1165 -
9267891-9268145,9268395-9268510,9268991-9269127,
9269645-9269808,9269892-9269972,9270783-9270962,
9271489-9271929,9273234-9273344,9274355-9274463,
9274618-9274643,9274823-9274903,9275013-9275211,
9275374-9275449,9275553-9275769,9276117-9276155,
9276684-9276783,9276962-9277084,9277171-9277895
Length = 1059
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 484 PVKQYSFILDPFQKEAILCIDNL-QSVLVSAHTSAGKTVV 600
P + Y I DP + +LC L +SVL +A +AGKTV+
Sbjct: 12 PAQDYPTI-DPTSFDVVLCGTGLPESVLAAACAAAGKTVL 50
>11_01_0805 - 7166265-7166759
Length = 164
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = +1
Query: 376 QSRIVIHTLETHEGCTHEVAIPP-NQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNL 552
+ R+ +H + H +P E+ LL P S L P+ A C+ N+
Sbjct: 46 RGRLGVHNPPAFKPTPHRPKLPTIRPEHPRLLAGFASPPSPPS--LSPWCSGAGQCVQNM 103
Query: 553 QSVLVSAHTSAGKTVVAEYAI 615
Q L + TSA T+ E +
Sbjct: 104 QDELPPSPTSASSTLAEEVVV 124
>01_06_0765 -
31808775-31809443,31809547-31809703,31809777-31809894,
31810170-31810308
Length = 360
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +1
Query: 175 DETPITEAAIQLPNVKNVEKPNLEELTAAGNKRAHDDIQYADTSVSKKPREEEEDSELIT 354
+E+ I A + V E + E +AAG + + ++++K EEEE ++I
Sbjct: 229 EESSINSPATDVFEVVRTESGDKENQSAAGAEDGEEVSCGIKAALAEKELEEEETKKMIE 288
Query: 355 DINVD 369
+ ++D
Sbjct: 289 EESID 293
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,621,846
Number of Sequences: 37544
Number of extensions: 276743
Number of successful extensions: 856
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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