Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_O24
(652 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D29641-1|BAA06124.2| 1046|Homo sapiens KIAA0052 protein protein. 139 7e-33
BC113509-1|AAI13510.1| 1042|Homo sapiens superkiller viralicidic... 139 7e-33
BC104996-1|AAI04997.1| 1042|Homo sapiens superkiller viralicidic... 139 7e-33
BC065258-1|AAH65258.1| 1043|Homo sapiens SKIV2L2 protein protein. 139 7e-33
BC028604-1|AAH28604.3| 1042|Homo sapiens superkiller viralicidic... 139 7e-33
Z48796-1|CAA88733.1| 1246|Homo sapiens helicase protein. 69 1e-11
X98378-1|CAA67024.1| 1246|Homo sapiens SKI2W protein protein. 69 1e-11
U09877-1|AAB52523.1| 1245|Homo sapiens helicase-like protein pro... 69 1e-11
CR753822-4|CAM26058.1| 1246|Homo sapiens superkiller viralicidic... 69 1e-11
BX005143-14|CAM25870.1| 1246|Homo sapiens superkiller viralicidi... 69 1e-11
BC015758-1|AAH15758.1| 1246|Homo sapiens superkiller viralicidic... 69 1e-11
AL844853-15|CAI41863.1| 1246|Homo sapiens superkiller viralicidi... 69 1e-11
AL662849-12|CAI17460.1| 1246|Homo sapiens superkiller viralicidi... 69 1e-11
AL645922-13|CAI41730.1| 1246|Homo sapiens superkiller viralicidi... 69 1e-11
AL049547-13|CAB89307.1| 1245|Homo sapiens dJ34F7.7 (superkiller ... 69 1e-11
AF059675-1|AAC78607.1| 1246|Homo sapiens putative RNA helicase S... 69 1e-11
AF019413-6|AAB67978.1| 1246|Homo sapiens helicase protein. 69 1e-11
BC038115-1|AAH38115.1| 1712|Homo sapiens hypothetical protein FL... 33 0.67
BC007820-1|AAH07820.1| 299|Homo sapiens FLJ20035 protein protein. 33 0.67
AK001649-1|BAA91809.1| 1174|Homo sapiens protein ( Homo sapiens ... 33 0.67
BC035617-1|AAH35617.1| 642|Homo sapiens NDC80 homolog, kinetoch... 33 0.88
BC005239-1|AAH05239.1| 524|Homo sapiens Unknown (protein for IM... 33 0.88
AF017790-1|AAB80726.1| 642|Homo sapiens retinoblastoma-associat... 33 0.88
Z70200-1|CAA94089.1| 1701|Homo sapiens U5 snRNP-specific 200kD p... 31 3.6
Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)... 31 4.7
X90568-1|CAA62188.1|26926|Homo sapiens titin protein. 31 4.7
U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain pro... 31 4.7
AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (meros... 31 4.7
AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (meros... 31 4.7
AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (meros... 31 4.7
AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (meros... 31 4.7
AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (meros... 31 4.7
AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (meros... 31 4.7
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein. 31 4.7
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein. 31 4.7
BC112891-1|AAI12892.1| 1887|Homo sapiens ASCC3L1 protein protein. 30 8.2
BC065924-1|AAH65924.1| 1821|Homo sapiens ASCC3L1 protein protein. 30 8.2
BC007577-1|AAH07577.1| 1308|Homo sapiens ASCC3L1 protein protein. 30 8.2
AY572488-1|AAS78571.1| 2136|Homo sapiens 200 kDa U5 snRNP-specif... 30 8.2
AK024391-1|BAB14906.1| 1811|Homo sapiens protein ( Homo sapiens ... 30 8.2
AB018331-1|BAA34508.2| 2026|Homo sapiens KIAA0788 protein protein. 30 8.2
>D29641-1|BAA06124.2| 1046|Homo sapiens KIAA0052 protein protein.
Length = 1046
Score = 139 bits (337), Expect = 7e-33
Identities = 72/136 (52%), Positives = 93/136 (68%), Gaps = 1/136 (0%)
Frame = +1
Query: 247 ELTAAGNKRAHDDIQYADTSV-SKKPREEEEDSELITDINVDLLQSRIVIHTLETHEGCT 423
E T G + D + D + KKPR EE +E D+++ L R+ + ++ET EGCT
Sbjct: 59 ESTNNGKNKRDVDFEGTDEPIFGKKPRIEESITE---DLSLADLMPRVKVQSVETVEGCT 115
Query: 424 HEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVA 603
HEVA+P ++Y PL P + K+Y FILD FQ+EAI C+DN QSVLVSAHTSAGKTV A
Sbjct: 116 HEVALPAEEDYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCA 175
Query: 604 EYAIALSLKNKQRVIY 651
EYAIAL+L+ KQRVI+
Sbjct: 176 EYAIALALREKQRVIF 191
>BC113509-1|AAI13510.1| 1042|Homo sapiens superkiller viralicidic
activity 2-like 2 (S. cerevisiae) protein.
Length = 1042
Score = 139 bits (337), Expect = 7e-33
Identities = 72/136 (52%), Positives = 93/136 (68%), Gaps = 1/136 (0%)
Frame = +1
Query: 247 ELTAAGNKRAHDDIQYADTSV-SKKPREEEEDSELITDINVDLLQSRIVIHTLETHEGCT 423
E T G + D + D + KKPR EE +E D+++ L R+ + ++ET EGCT
Sbjct: 55 ESTNNGKNKRDVDFEGTDEPIFGKKPRIEESITE---DLSLADLMPRVKVQSVETVEGCT 111
Query: 424 HEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVA 603
HEVA+P ++Y PL P + K+Y FILD FQ+EAI C+DN QSVLVSAHTSAGKTV A
Sbjct: 112 HEVALPAEEDYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCA 171
Query: 604 EYAIALSLKNKQRVIY 651
EYAIAL+L+ KQRVI+
Sbjct: 172 EYAIALALREKQRVIF 187
>BC104996-1|AAI04997.1| 1042|Homo sapiens superkiller viralicidic
activity 2-like 2 (S. cerevisiae) protein.
Length = 1042
Score = 139 bits (337), Expect = 7e-33
Identities = 72/136 (52%), Positives = 93/136 (68%), Gaps = 1/136 (0%)
Frame = +1
Query: 247 ELTAAGNKRAHDDIQYADTSV-SKKPREEEEDSELITDINVDLLQSRIVIHTLETHEGCT 423
E T G + D + D + KKPR EE +E D+++ L R+ + ++ET EGCT
Sbjct: 55 ESTNNGKNKRDVDFEGTDEPIFGKKPRIEESITE---DLSLADLMPRVKVQSVETVEGCT 111
Query: 424 HEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVA 603
HEVA+P ++Y PL P + K+Y FILD FQ+EAI C+DN QSVLVSAHTSAGKTV A
Sbjct: 112 HEVALPAEEDYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCA 171
Query: 604 EYAIALSLKNKQRVIY 651
EYAIAL+L+ KQRVI+
Sbjct: 172 EYAIALALREKQRVIF 187
>BC065258-1|AAH65258.1| 1043|Homo sapiens SKIV2L2 protein protein.
Length = 1043
Score = 139 bits (337), Expect = 7e-33
Identities = 72/136 (52%), Positives = 93/136 (68%), Gaps = 1/136 (0%)
Frame = +1
Query: 247 ELTAAGNKRAHDDIQYADTSV-SKKPREEEEDSELITDINVDLLQSRIVIHTLETHEGCT 423
E T G + D + D + KKPR EE +E D+++ L R+ + ++ET EGCT
Sbjct: 56 ESTNNGKNKRDVDFEGTDEPIFGKKPRIEESITE---DLSLADLMPRVKVQSVETVEGCT 112
Query: 424 HEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVA 603
HEVA+P ++Y PL P + K+Y FILD FQ+EAI C+DN QSVLVSAHTSAGKTV A
Sbjct: 113 HEVALPAEEDYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCA 172
Query: 604 EYAIALSLKNKQRVIY 651
EYAIAL+L+ KQRVI+
Sbjct: 173 EYAIALALREKQRVIF 188
>BC028604-1|AAH28604.3| 1042|Homo sapiens superkiller viralicidic
activity 2-like 2 (S. cerevisiae) protein.
Length = 1042
Score = 139 bits (337), Expect = 7e-33
Identities = 72/136 (52%), Positives = 93/136 (68%), Gaps = 1/136 (0%)
Frame = +1
Query: 247 ELTAAGNKRAHDDIQYADTSV-SKKPREEEEDSELITDINVDLLQSRIVIHTLETHEGCT 423
E T G + D + D + KKPR EE +E D+++ L R+ + ++ET EGCT
Sbjct: 55 ESTNNGKNKRDVDFEGTDEPIFGKKPRIEESITE---DLSLADLMPRVKVQSVETVEGCT 111
Query: 424 HEVAIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVA 603
HEVA+P ++Y PL P + K+Y FILD FQ+EAI C+DN QSVLVSAHTSAGKTV A
Sbjct: 112 HEVALPAEEDYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCA 171
Query: 604 EYAIALSLKNKQRVIY 651
EYAIAL+L+ KQRVI+
Sbjct: 172 EYAIALALREKQRVIF 187
>Z48796-1|CAA88733.1| 1246|Homo sapiens helicase protein.
Length = 1246
Score = 69.3 bits (162), Expect = 1e-11
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = +1
Query: 433 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 612
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 289 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 345
Query: 613 IALSLKNKQRVIY 651
IAL+ K+ R IY
Sbjct: 346 IALAQKHMTRTIY 358
>X98378-1|CAA67024.1| 1246|Homo sapiens SKI2W protein protein.
Length = 1246
Score = 69.3 bits (162), Expect = 1e-11
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = +1
Query: 433 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 612
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 289 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 345
Query: 613 IALSLKNKQRVIY 651
IAL+ K+ R IY
Sbjct: 346 IALAQKHMTRTIY 358
>U09877-1|AAB52523.1| 1245|Homo sapiens helicase-like protein
protein.
Length = 1245
Score = 69.3 bits (162), Expect = 1e-11
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = +1
Query: 433 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 612
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 288 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 344
Query: 613 IALSLKNKQRVIY 651
IAL+ K+ R IY
Sbjct: 345 IALAQKHMTRTIY 357
>CR753822-4|CAM26058.1| 1246|Homo sapiens superkiller viralicidic
activity 2-like (S. cerevisiae) protein.
Length = 1246
Score = 69.3 bits (162), Expect = 1e-11
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = +1
Query: 433 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 612
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 289 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 345
Query: 613 IALSLKNKQRVIY 651
IAL+ K+ R IY
Sbjct: 346 IALAQKHMTRTIY 358
>BX005143-14|CAM25870.1| 1246|Homo sapiens superkiller viralicidic
activity 2-like (S. cerevisiae) protein.
Length = 1246
Score = 69.3 bits (162), Expect = 1e-11
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = +1
Query: 433 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 612
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 289 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 345
Query: 613 IALSLKNKQRVIY 651
IAL+ K+ R IY
Sbjct: 346 IALAQKHMTRTIY 358
>BC015758-1|AAH15758.1| 1246|Homo sapiens superkiller viralicidic
activity 2-like (S. cerevisiae) protein.
Length = 1246
Score = 69.3 bits (162), Expect = 1e-11
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = +1
Query: 433 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 612
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 289 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 345
Query: 613 IALSLKNKQRVIY 651
IAL+ K+ R IY
Sbjct: 346 IALAQKHMTRTIY 358
>AL844853-15|CAI41863.1| 1246|Homo sapiens superkiller viralicidic
activity 2-like (S. cerevisiae) protein.
Length = 1246
Score = 69.3 bits (162), Expect = 1e-11
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = +1
Query: 433 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 612
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 289 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 345
Query: 613 IALSLKNKQRVIY 651
IAL+ K+ R IY
Sbjct: 346 IALAQKHMTRTIY 358
>AL662849-12|CAI17460.1| 1246|Homo sapiens superkiller viralicidic
activity 2-like (S. cerevisiae) protein.
Length = 1246
Score = 69.3 bits (162), Expect = 1e-11
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = +1
Query: 433 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 612
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 289 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 345
Query: 613 IALSLKNKQRVIY 651
IAL+ K+ R IY
Sbjct: 346 IALAQKHMTRTIY 358
>AL645922-13|CAI41730.1| 1246|Homo sapiens superkiller viralicidic
activity 2-like (S. cerevisiae) protein.
Length = 1246
Score = 69.3 bits (162), Expect = 1e-11
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = +1
Query: 433 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 612
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 289 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 345
Query: 613 IALSLKNKQRVIY 651
IAL+ K+ R IY
Sbjct: 346 IALAQKHMTRTIY 358
>AL049547-13|CAB89307.1| 1245|Homo sapiens dJ34F7.7 (superkiller
viralicidic activity 2 (S. cerevisiae homolog)-like
(SKI2 protein.
Length = 1245
Score = 69.3 bits (162), Expect = 1e-11
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = +1
Query: 433 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 612
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 288 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 344
Query: 613 IALSLKNKQRVIY 651
IAL+ K+ R IY
Sbjct: 345 IALAQKHMTRTIY 357
>AF059675-1|AAC78607.1| 1246|Homo sapiens putative RNA helicase
Ski2w protein.
Length = 1246
Score = 69.3 bits (162), Expect = 1e-11
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = +1
Query: 433 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 612
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 289 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 345
Query: 613 IALSLKNKQRVIY 651
IAL+ K+ R IY
Sbjct: 346 IALAQKHMTRTIY 358
>AF019413-6|AAB67978.1| 1246|Homo sapiens helicase protein.
Length = 1246
Score = 69.3 bits (162), Expect = 1e-11
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = +1
Query: 433 AIPPNQEYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYA 612
A P ++ L+P +P Q++F D FQK+AIL ++ SV V+AHTSAGKTVVAEYA
Sbjct: 289 ATSPVGDFYRLIP---QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYA 345
Query: 613 IALSLKNKQRVIY 651
IAL+ K+ R IY
Sbjct: 346 IALAQKHMTRTIY 358
>BC038115-1|AAH38115.1| 1712|Homo sapiens hypothetical protein
FLJ20035 protein.
Length = 1712
Score = 33.5 bits (73), Expect = 0.67
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 502 FILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLK 630
FI D +Q+E + +D +S ++ A TS+GKT + Y + LK
Sbjct: 762 FIPDTWQRELLDVVDKNESAVIVAPTSSGKTYASYYCMEKVLK 804
>BC007820-1|AAH07820.1| 299|Homo sapiens FLJ20035 protein protein.
Length = 299
Score = 33.5 bits (73), Expect = 0.67
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 502 FILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLK 630
FI D +Q+E + +D +S ++ A TS+GKT + Y + LK
Sbjct: 35 FIPDTWQRELLDVVDKNESAVIVAPTSSGKTYASYYCMEKVLK 77
>AK001649-1|BAA91809.1| 1174|Homo sapiens protein ( Homo sapiens
cDNA FLJ10787 fis, clone NT2RP4000481, weakly similar to
ATP-DEPENDENT RNA HELICASE DOB1. ).
Length = 1174
Score = 33.5 bits (73), Expect = 0.67
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 502 FILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLK 630
FI D +Q+E + +D +S ++ A TS+GKT + Y + LK
Sbjct: 762 FIPDTWQRELLDVVDKNESAVIVAPTSSGKTYASYYCMEKVLK 804
>BC035617-1|AAH35617.1| 642|Homo sapiens NDC80 homolog, kinetochore
complex component (S. cerevisiae) protein.
Length = 642
Score = 33.1 bits (72), Expect = 0.88
Identities = 29/110 (26%), Positives = 49/110 (44%)
Frame = +1
Query: 166 DCFDETPITEAAIQLPNVKNVEKPNLEELTAAGNKRAHDDIQYADTSVSKKPREEEEDSE 345
D FDE E +L ++ NV+ LE L A N+ ++ I + K+P E +
Sbjct: 241 DSFDEMN-AELQSKLKDLFNVDAFKLESLEAK-NRALNEQIARLEQEREKEPNRLESLRK 298
Query: 346 LITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQ 495
L + D+ + + + LE+H + N+E A + L E +KQ
Sbjct: 299 LKASLQGDVQKYQAYMSNLESHSAILDQKLNGLNEEIA-RVELECETIKQ 347
>BC005239-1|AAH05239.1| 524|Homo sapiens Unknown (protein for
IMAGE:3997364) protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.88
Identities = 29/110 (26%), Positives = 49/110 (44%)
Frame = +1
Query: 166 DCFDETPITEAAIQLPNVKNVEKPNLEELTAAGNKRAHDDIQYADTSVSKKPREEEEDSE 345
D FDE E +L ++ NV+ LE L A N+ ++ I + K+P E +
Sbjct: 241 DSFDEMN-AELQSKLKDLFNVDAFKLESLEAK-NRALNEQIARLEQEREKEPNRLESLRK 298
Query: 346 LITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQ 495
L + D+ + + + LE+H + N+E A + L E +KQ
Sbjct: 299 LKASLQGDVQKYQAYMSNLESHSAILDQKLNGLNEEIA-RVELECETIKQ 347
>AF017790-1|AAB80726.1| 642|Homo sapiens retinoblastoma-associated
protein HEC protein.
Length = 642
Score = 33.1 bits (72), Expect = 0.88
Identities = 29/110 (26%), Positives = 49/110 (44%)
Frame = +1
Query: 166 DCFDETPITEAAIQLPNVKNVEKPNLEELTAAGNKRAHDDIQYADTSVSKKPREEEEDSE 345
D FDE E +L ++ NV+ LE L A N+ ++ I + K+P E +
Sbjct: 241 DSFDEMN-AELQSKLKDLFNVDAFKLESLEAK-NRALNEQIARLEQEREKEPNRLESLRK 298
Query: 346 LITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQ 495
L + D+ + + + LE+H + N+E A + L E +KQ
Sbjct: 299 LKASLQGDVQKYQAYMSNLESHSAILDQKLNGLNEEIA-RVELECETIKQ 347
>Z70200-1|CAA94089.1| 1701|Homo sapiens U5 snRNP-specific 200kD
protein protein.
Length = 1701
Score = 31.1 bits (67), Expect = 3.6
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 12/83 (14%)
Frame = +1
Query: 439 PPNQEYAPLLPLTTEPVKQYSF---------ILDPFQKEAILCIDNLQ-SVLVSAHTSAG 588
PP E L PL ++ +F +P Q + + N +V V A T +G
Sbjct: 861 PPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSG 920
Query: 589 KTVVAEYAI-ALSLKNKQ-RVIY 651
KT+ AE+AI + L+N + R +Y
Sbjct: 921 KTICAEFAILRMLLQNSEGRCVY 943
>Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)
protein.
Length = 3110
Score = 30.7 bits (66), Expect = 4.7
Identities = 25/99 (25%), Positives = 46/99 (46%)
Frame = +1
Query: 304 SVSKKPREEEEDSELITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTE 483
++S EEEED+E + + + L + + I T + EV + P++E+ +L L E
Sbjct: 605 TISYDLEEEEEDTERVLQLMIILEGNDLSISTAQ------DEVYLHPSEEHTNVLLLKEE 658
Query: 484 PVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVV 600
+ +KE + + NL+ VL+ S G +
Sbjct: 659 SFTIHGTHFPVRRKEFMTVLANLKRVLLQITYSFGMDAI 697
>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
Length = 26926
Score = 30.7 bits (66), Expect = 4.7
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +1
Query: 412 EGCTHEVAIPPNQEYAPLLPL-TTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAG 588
EGC++ + + EY LP TTEPVK L P + + N ++ S G
Sbjct: 18767 EGCSYYFRVLASNEYGIGLPAETTEPVKVSEPPLPPGRVTLVDVTRNTATIKWEKPESDG 18826
Query: 589 KTVVAEYAIALSLKNKQR 642
+ + Y + + K ++
Sbjct: 18827 GSKITGYVVEMQTKGSEK 18844
>U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain
protein.
Length = 3110
Score = 30.7 bits (66), Expect = 4.7
Identities = 25/99 (25%), Positives = 46/99 (46%)
Frame = +1
Query: 304 SVSKKPREEEEDSELITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTE 483
++S EEEED+E + + + L + + I T + EV + P++E+ +L L E
Sbjct: 605 TISYDLEEEEEDTERVLQLMIILEGNDLSISTAQ------DEVYLHPSEEHTNVLLLKEE 658
Query: 484 PVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVV 600
+ +KE + + NL+ VL+ S G +
Sbjct: 659 SFTIHGTHFPVRRKEFMTVLANLKRVLLQITYSFGMDAI 697
>AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 30.7 bits (66), Expect = 4.7
Identities = 25/99 (25%), Positives = 46/99 (46%)
Frame = +1
Query: 304 SVSKKPREEEEDSELITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTE 483
++S EEEED+E + + + L + + I T + EV + P++E+ +L L E
Sbjct: 605 TISYDLEEEEEDTERVLQLMIILEGNDLSISTAQ------DEVYLHPSEEHTNVLLLKEE 658
Query: 484 PVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVV 600
+ +KE + + NL+ VL+ S G +
Sbjct: 659 SFTIHGTHFPVRRKEFMTVLANLKRVLLQITYSFGMDAI 697
>AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 30.7 bits (66), Expect = 4.7
Identities = 25/99 (25%), Positives = 46/99 (46%)
Frame = +1
Query: 304 SVSKKPREEEEDSELITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTE 483
++S EEEED+E + + + L + + I T + EV + P++E+ +L L E
Sbjct: 605 TISYDLEEEEEDTERVLQLMIILEGNDLSISTAQ------DEVYLHPSEEHTNVLLLKEE 658
Query: 484 PVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVV 600
+ +KE + + NL+ VL+ S G +
Sbjct: 659 SFTIHGTHFPVRRKEFMTVLANLKRVLLQITYSFGMDAI 697
>AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 30.7 bits (66), Expect = 4.7
Identities = 25/99 (25%), Positives = 46/99 (46%)
Frame = +1
Query: 304 SVSKKPREEEEDSELITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTE 483
++S EEEED+E + + + L + + I T + EV + P++E+ +L L E
Sbjct: 605 TISYDLEEEEEDTERVLQLMIILEGNDLSISTAQ------DEVYLHPSEEHTNVLLLKEE 658
Query: 484 PVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVV 600
+ +KE + + NL+ VL+ S G +
Sbjct: 659 SFTIHGTHFPVRRKEFMTVLANLKRVLLQITYSFGMDAI 697
>AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 30.7 bits (66), Expect = 4.7
Identities = 25/99 (25%), Positives = 46/99 (46%)
Frame = +1
Query: 304 SVSKKPREEEEDSELITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTE 483
++S EEEED+E + + + L + + I T + EV + P++E+ +L L E
Sbjct: 605 TISYDLEEEEEDTERVLQLMIILEGNDLSISTAQ------DEVYLHPSEEHTNVLLLKEE 658
Query: 484 PVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVV 600
+ +KE + + NL+ VL+ S G +
Sbjct: 659 SFTIHGTHFPVRRKEFMTVLANLKRVLLQITYSFGMDAI 697
>AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 30.7 bits (66), Expect = 4.7
Identities = 25/99 (25%), Positives = 46/99 (46%)
Frame = +1
Query: 304 SVSKKPREEEEDSELITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTE 483
++S EEEED+E + + + L + + I T + EV + P++E+ +L L E
Sbjct: 605 TISYDLEEEEEDTERVLQLMIILEGNDLSISTAQ------DEVYLHPSEEHTNVLLLKEE 658
Query: 484 PVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVV 600
+ +KE + + NL+ VL+ S G +
Sbjct: 659 SFTIHGTHFPVRRKEFMTVLANLKRVLLQITYSFGMDAI 697
>AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 30.7 bits (66), Expect = 4.7
Identities = 25/99 (25%), Positives = 46/99 (46%)
Frame = +1
Query: 304 SVSKKPREEEEDSELITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTE 483
++S EEEED+E + + + L + + I T + EV + P++E+ +L L E
Sbjct: 605 TISYDLEEEEEDTERVLQLMIILEGNDLSISTAQ------DEVYLHPSEEHTNVLLLKEE 658
Query: 484 PVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVV 600
+ +KE + + NL+ VL+ S G +
Sbjct: 659 SFTIHGTHFPVRRKEFMTVLANLKRVLLQITYSFGMDAI 697
>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
Length = 30000
Score = 30.7 bits (66), Expect = 4.7
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +1
Query: 412 EGCTHEVAIPPNQEYAPLLPL-TTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAG 588
EGC++ + + EY LP TTEPVK L P + + N ++ S G
Sbjct: 26191 EGCSYYFRVLASNEYGIGLPAETTEPVKVSEPPLPPGRVTLVDVTRNTATIKWEKPESDG 26250
Query: 589 KTVVAEYAIALSLKNKQR 642
+ + Y + + K ++
Sbjct: 26251 GSKITGYVVEMQTKGSEK 26268
>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
Length = 26926
Score = 30.7 bits (66), Expect = 4.7
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +1
Query: 412 EGCTHEVAIPPNQEYAPLLPL-TTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAG 588
EGC++ + + EY LP TTEPVK L P + + N ++ S G
Sbjct: 18767 EGCSYYFRVLASNEYGIGLPAETTEPVKVSEPPLPPGRVTLVDVTRNTATIKWEKPESDG 18826
Query: 589 KTVVAEYAIALSLKNKQR 642
+ + Y + + K ++
Sbjct: 18827 GSKITGYVVEMQTKGSEK 18844
>BC112891-1|AAI12892.1| 1887|Homo sapiens ASCC3L1 protein protein.
Length = 1887
Score = 29.9 bits (64), Expect = 8.2
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Frame = +1
Query: 439 PPNQEYAPLLPLTTEPVKQYSF---------ILDPFQKEAILCIDNLQ-SVLVSAHTSAG 588
PP E L PL ++ +F +P Q + + N +V V A T +G
Sbjct: 1047 PPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSG 1106
Query: 589 KTVVAEYAIALSL--KNKQRVIY 651
KT+ AE+AI L ++ R +Y
Sbjct: 1107 KTICAEFAILRMLLQSSEGRCVY 1129
>BC065924-1|AAH65924.1| 1821|Homo sapiens ASCC3L1 protein protein.
Length = 1821
Score = 29.9 bits (64), Expect = 8.2
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Frame = +1
Query: 439 PPNQEYAPLLPLTTEPVKQYSF---------ILDPFQKEAILCIDNLQ-SVLVSAHTSAG 588
PP E L PL ++ +F +P Q + + N +V V A T +G
Sbjct: 981 PPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSG 1040
Query: 589 KTVVAEYAIALSL--KNKQRVIY 651
KT+ AE+AI L ++ R +Y
Sbjct: 1041 KTICAEFAILRMLLQSSEGRCVY 1063
>BC007577-1|AAH07577.1| 1308|Homo sapiens ASCC3L1 protein protein.
Length = 1308
Score = 29.9 bits (64), Expect = 8.2
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Frame = +1
Query: 439 PPNQEYAPLLPLTTEPVKQYSF---------ILDPFQKEAILCIDNLQ-SVLVSAHTSAG 588
PP E L PL ++ +F +P Q + + N +V V A T +G
Sbjct: 468 PPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSG 527
Query: 589 KTVVAEYAIALSL--KNKQRVIY 651
KT+ AE+AI L ++ R +Y
Sbjct: 528 KTICAEFAILRMLLQSSEGRCVY 550
>AY572488-1|AAS78571.1| 2136|Homo sapiens 200 kDa U5 snRNP-specific
spliceosomal protein protein.
Length = 2136
Score = 29.9 bits (64), Expect = 8.2
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Frame = +1
Query: 439 PPNQEYAPLLPLTTEPVKQYSF---------ILDPFQKEAILCIDNLQ-SVLVSAHTSAG 588
PP E L PL ++ +F +P Q + + N +V V A T +G
Sbjct: 1296 PPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSG 1355
Query: 589 KTVVAEYAIALSL--KNKQRVIY 651
KT+ AE+AI L ++ R +Y
Sbjct: 1356 KTICAEFAILRMLLQSSEGRCVY 1378
>AK024391-1|BAB14906.1| 1811|Homo sapiens protein ( Homo sapiens cDNA
FLJ14329 fis, clone PLACE4000259, highly similar to
H.sapiens gene for U5 snRNP-specific 200kD protein. ).
Length = 1811
Score = 29.9 bits (64), Expect = 8.2
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Frame = +1
Query: 439 PPNQEYAPLLPLTTEPVKQYSF---------ILDPFQKEAILCIDNLQ-SVLVSAHTSAG 588
PP E L PL ++ +F +P Q + + N +V V A T +G
Sbjct: 971 PPPTELLDLQPLPVSALRNSAFESLYRDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSG 1030
Query: 589 KTVVAEYAIALSL--KNKQRVIY 651
KT+ AE+AI L ++ R +Y
Sbjct: 1031 KTICAEFAILRMLLQSSEGRCVY 1053
>AB018331-1|BAA34508.2| 2026|Homo sapiens KIAA0788 protein protein.
Length = 2026
Score = 29.9 bits (64), Expect = 8.2
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Frame = +1
Query: 439 PPNQEYAPLLPLTTEPVKQYSF---------ILDPFQKEAILCIDNLQ-SVLVSAHTSAG 588
PP E L PL ++ +F +P Q + + N +V V A T +G
Sbjct: 1186 PPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSG 1245
Query: 589 KTVVAEYAIALSL--KNKQRVIY 651
KT+ AE+AI L ++ R +Y
Sbjct: 1246 KTICAEFAILRMLLQSSEGRCVY 1268
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,204,934
Number of Sequences: 237096
Number of extensions: 1652178
Number of successful extensions: 4245
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 4112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4245
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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