Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_O14
         (536 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0942 - 29551856-29552344,29552569-29552934,29553985-29554203     29   2.3  
02_01_0722 + 5405550-5405810,5406654-5407399,5407575-5408046,540...    29   2.3  
06_03_1313 - 29252335-29252446,29253430-29253671,29253770-292538...    27   7.2  
01_05_0281 - 20334578-20334961,20335859-20336005,20336088-203361...    27   9.5  

>04_04_0942 - 29551856-29552344,29552569-29552934,29553985-29554203
          Length = 357

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
 Frame = -1

Query: 503 NPLQCFXFGWRTYLWCSRICKYGYSIGTRNELFYAISRAL----LFSVWHQWDFVLTIVY 336
           N L    F W  Y  C +I  Y +++GT    F    R L    L  +W + DF L +V 
Sbjct: 128 NHLVIIAFDWNAYKQCLKIHPYCFALGTDGVDFSEEKRFLTSGYLEMMWKRIDF-LRLVL 186

Query: 335 FEPFNTLFA 309
              F+ +F+
Sbjct: 187 ESGFSFIFS 195


>02_01_0722 +
           5405550-5405810,5406654-5407399,5407575-5408046,
           5408129-5408296,5408301-5408418,5408845-5409056,
           5409165-5409287,5409395-5409880,5409976-5410401
          Length = 1003

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
 Frame = -1

Query: 506 CNPLQCFXFGWRTYLWCSRICKYGYS-------IGTRNELFYAI 396
           C+P+Q F  GWR Y+      K GYS       +GT    FY++
Sbjct: 326 CSPVQ-FIIGWRFYVGAYHALKRGYSNMDVLVALGTNAAYFYSV 368


>06_03_1313 -
           29252335-29252446,29253430-29253671,29253770-29253848,
           29254991-29255130,29255262-29255571,29255810-29255952,
           29256106-29256306,29256453-29256581,29256921-29257199,
           29258036-29259720,29261255-29261764,29261901-29262108,
           29264347-29264458,29264594-29264763
          Length = 1439

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 264 KKKTWQQKYCILFNASKQGIERLE 335
           K + WQ + C LFNA +  +E  E
Sbjct: 901 KCECWQHQICALFNARRNDVEEAE 924


>01_05_0281 -
           20334578-20334961,20335859-20336005,20336088-20336141,
           20336391-20336555,20337331-20337855
          Length = 424

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = -1

Query: 278 PSFLFWKFAKHISTXQ--GEIVNNR 210
           PSFLF   A H S  Q  GE+VN R
Sbjct: 318 PSFLFSHLASHASMVQFGGEVVNTR 342


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,687,771
Number of Sequences: 37544
Number of extensions: 232398
Number of successful extensions: 415
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 415
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)