Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_O14
(536 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70987-1|AAC51127.1| 481|Homo sapiens GAP binding protein p62do... 31 2.0
BC114440-1|AAI14441.1| 481|Homo sapiens docking protein 1, 62kD... 31 2.0
AK222883-1|BAD96603.1| 481|Homo sapiens docking protein 1 varia... 31 2.0
AF180527-1|AAF19167.1| 177|Homo sapiens p22Dokdel protein. 31 2.0
AC005033-2|AAX93224.1| 481|Homo sapiens unknown protein. 31 2.0
BC012089-1|AAH12089.1| 856|Homo sapiens PROM1 protein protein. 30 6.0
AY449693-1|AAS19709.1| 842|Homo sapiens prominin 1 isoform s7 p... 30 6.0
AY449692-1|AAS19708.1| 834|Homo sapiens prominin 1 isoform s6 p... 30 6.0
AY449691-1|AAS19707.1| 833|Homo sapiens prominin 1 isoform s5 p... 30 6.0
AY449690-1|AAS19706.1| 825|Homo sapiens prominin 1 isoform s4 p... 30 6.0
AY449689-1|AAS19705.1| 830|Homo sapiens prominin 1 isoform s3 p... 30 6.0
AF507034-1|AAM33415.1| 856|Homo sapiens AC133-2 antigen protein. 30 6.0
AF035299-1|AAB88182.1| 509|Homo sapiens protein ( Homo sapiens ... 30 6.0
AF027208-1|AAB92514.1| 865|Homo sapiens AC133 antigen protein. 30 6.0
>U70987-1|AAC51127.1| 481|Homo sapiens GAP binding protein p62dok
protein.
Length = 481
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 270 KTWQQKYCILFNASKQGIERLEIYDSK 350
K W++ + +L+ AS G+ RLE +D K
Sbjct: 20 KRWRKTWAVLYPASPHGVARLEFFDHK 46
>BC114440-1|AAI14441.1| 481|Homo sapiens docking protein 1, 62kDa
(downstream of tyrosine kinase 1) protein.
Length = 481
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 270 KTWQQKYCILFNASKQGIERLEIYDSK 350
K W++ + +L+ AS G+ RLE +D K
Sbjct: 20 KRWRKTWAVLYPASPHGVARLEFFDHK 46
>AK222883-1|BAD96603.1| 481|Homo sapiens docking protein 1 variant
protein.
Length = 481
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 270 KTWQQKYCILFNASKQGIERLEIYDSK 350
K W++ + +L+ AS G+ RLE +D K
Sbjct: 20 KRWRKTWAVLYPASPHGVARLEFFDHK 46
>AF180527-1|AAF19167.1| 177|Homo sapiens p22Dokdel protein.
Length = 177
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 270 KTWQQKYCILFNASKQGIERLEIYDSK 350
K W++ + +L+ AS G+ RLE +D K
Sbjct: 20 KRWRKTWAVLYPASPHGVARLEFFDHK 46
>AC005033-2|AAX93224.1| 481|Homo sapiens unknown protein.
Length = 481
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 270 KTWQQKYCILFNASKQGIERLEIYDSK 350
K W++ + +L+ AS G+ RLE +D K
Sbjct: 20 KRWRKTWAVLYPASPHGVARLEFFDHK 46
>BC012089-1|AAH12089.1| 856|Homo sapiens PROM1 protein protein.
Length = 856
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -1
Query: 359 DFVLTIVYFEPFNTLFAGIEKYAIFLLPSFLF-WKFAKHISTXQGEIV 219
D L +P N + GI K +FLLP+ +F K AK+ E V
Sbjct: 771 DVFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDV 818
>AY449693-1|AAS19709.1| 842|Homo sapiens prominin 1 isoform s7
protein.
Length = 842
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -1
Query: 359 DFVLTIVYFEPFNTLFAGIEKYAIFLLPSFLF-WKFAKHISTXQGEIV 219
D L +P N + GI K +FLLP+ +F K AK+ E V
Sbjct: 780 DVFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDV 827
>AY449692-1|AAS19708.1| 834|Homo sapiens prominin 1 isoform s6
protein.
Length = 834
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -1
Query: 359 DFVLTIVYFEPFNTLFAGIEKYAIFLLPSFLF-WKFAKHISTXQGEIV 219
D L +P N + GI K +FLLP+ +F K AK+ E V
Sbjct: 780 DVFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDV 827
>AY449691-1|AAS19707.1| 833|Homo sapiens prominin 1 isoform s5
protein.
Length = 833
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -1
Query: 359 DFVLTIVYFEPFNTLFAGIEKYAIFLLPSFLF-WKFAKHISTXQGEIV 219
D L +P N + GI K +FLLP+ +F K AK+ E V
Sbjct: 771 DVFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDV 818
>AY449690-1|AAS19706.1| 825|Homo sapiens prominin 1 isoform s4
protein.
Length = 825
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -1
Query: 359 DFVLTIVYFEPFNTLFAGIEKYAIFLLPSFLF-WKFAKHISTXQGEIV 219
D L +P N + GI K +FLLP+ +F K AK+ E V
Sbjct: 771 DVFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDV 818
>AY449689-1|AAS19705.1| 830|Homo sapiens prominin 1 isoform s3
protein.
Length = 830
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -1
Query: 359 DFVLTIVYFEPFNTLFAGIEKYAIFLLPSFLF-WKFAKHISTXQGEIV 219
D L +P N + GI K +FLLP+ +F K AK+ E V
Sbjct: 771 DVFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDV 818
>AF507034-1|AAM33415.1| 856|Homo sapiens AC133-2 antigen protein.
Length = 856
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -1
Query: 359 DFVLTIVYFEPFNTLFAGIEKYAIFLLPSFLF-WKFAKHISTXQGEIV 219
D L +P N + GI K +FLLP+ +F K AK+ E V
Sbjct: 771 DVFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDV 818
>AF035299-1|AAB88182.1| 509|Homo sapiens protein ( Homo sapiens
clone 23863 mRNA, partial cds. ).
Length = 509
Score = 29.9 bits (64), Expect = 6.0
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 276 WQQKYCILFNASKQGIERLEIYDSK 350
W++ + +L+ AS G+ RLE +D K
Sbjct: 50 WRKTWAVLYPASPHGVARLEFFDHK 74
>AF027208-1|AAB92514.1| 865|Homo sapiens AC133 antigen protein.
Length = 865
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -1
Query: 359 DFVLTIVYFEPFNTLFAGIEKYAIFLLPSFLF-WKFAKHISTXQGEIV 219
D L +P N + GI K +FLLP+ +F K AK+ E V
Sbjct: 780 DVFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDV 827
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,689,003
Number of Sequences: 237096
Number of extensions: 1386898
Number of successful extensions: 1966
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1966
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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