Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_O14
(536 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016659-1|AAB66047.3| 1251|Caenorhabditis elegans Hypothetical ... 30 1.2
AF022974-3|AAC48037.1| 346|Caenorhabditis elegans Seven tm rece... 29 1.6
Z70036-5|CAO78725.1| 712|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z70036-4|CAO78724.1| 733|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z70036-3|CAA93876.1| 757|Caenorhabditis elegans Hypothetical pr... 28 4.9
U64848-3|AAB04882.1| 323|Caenorhabditis elegans Hypothetical pr... 27 6.5
AF100655-2|AAK68684.2| 366|Caenorhabditis elegans Map kinase ac... 27 6.5
AF100655-1|AAC68944.1| 443|Caenorhabditis elegans Map kinase ac... 27 6.5
Z72510-1|CAA96651.1| 572|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z66514-3|CAA91343.1| 854|Caenorhabditis elegans Hypothetical pr... 27 8.6
U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astaci... 27 8.6
AY342006-1|AAQ22724.1| 854|Caenorhabditis elegans TRP-3 channel... 27 8.6
AJ276029-1|CAC81656.1| 854|Caenorhabditis elegans TRP homologou... 27 8.6
>AF016659-1|AAB66047.3| 1251|Caenorhabditis elegans Hypothetical
protein F40E12.2 protein.
Length = 1251
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 252 SKFPKKKTWQQKYCILFNASKQGIER 329
S F KKK W+Q+ CI+ S IE+
Sbjct: 1098 SSFYKKKKWEQRSCIILKHSDSKIEK 1123
>AF022974-3|AAC48037.1| 346|Caenorhabditis elegans Seven tm
receptor protein 207 protein.
Length = 346
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = -1
Query: 488 FXFGWRTYLWCSRICKYGYSIGTR---NELFYAI 396
F FG+R Y+ +ICK S TR +LFY++
Sbjct: 219 FYFGFRCYISLQKICKQNVSQNTRGLQKQLFYSL 252
>Z70036-5|CAO78725.1| 712|Caenorhabditis elegans Hypothetical
protein T01B4.2c protein.
Length = 712
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 407 FYAISRALLFSVWHQWDFVLTIVYF 333
F+ + +L+ S W +WDF LT YF
Sbjct: 324 FFMVVCSLIVSFWEKWDF-LTAFYF 347
>Z70036-4|CAO78724.1| 733|Caenorhabditis elegans Hypothetical
protein T01B4.2b protein.
Length = 733
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 407 FYAISRALLFSVWHQWDFVLTIVYF 333
F+ + +L+ S W +WDF LT YF
Sbjct: 345 FFMVVCSLIVSFWEKWDF-LTAFYF 368
>Z70036-3|CAA93876.1| 757|Caenorhabditis elegans Hypothetical
protein T01B4.2a protein.
Length = 757
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 407 FYAISRALLFSVWHQWDFVLTIVYF 333
F+ + +L+ S W +WDF LT YF
Sbjct: 369 FFMVVCSLIVSFWEKWDF-LTAFYF 392
>U64848-3|AAB04882.1| 323|Caenorhabditis elegans Hypothetical
protein C50E3.7 protein.
Length = 323
Score = 27.5 bits (58), Expect = 6.5
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = -1
Query: 497 LQCFXFGWRTYLWCSRICKYGYSIGTRNELFYAISRALLFSVWHQWDFVLTIVYFEPFNT 318
+QCF R +L IC Y T + + +S+ L+ + F LT+ + N
Sbjct: 120 IQCFVVSLRVFLHILTICIIIYVSNTESSVSKFLSQCSLYVDYCSNFFSLTVTFLMSLNR 179
Query: 317 LF 312
F
Sbjct: 180 CF 181
>AF100655-2|AAK68684.2| 366|Caenorhabditis elegans Map kinase
activated protein kinaseprotein 2, isoform b protein.
Length = 366
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 200 EIKSGCLLFPPXRWKCV*QISKKENLATKILHT 298
+IKSG FP W CV + +K +L K+L T
Sbjct: 229 KIKSGQYTFPSPEWDCVSEAAK--DLIRKLLRT 259
>AF100655-1|AAC68944.1| 443|Caenorhabditis elegans Map kinase
activated protein kinaseprotein 2, isoform a protein.
Length = 443
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 200 EIKSGCLLFPPXRWKCV*QISKKENLATKILHT 298
+IKSG FP W CV + +K +L K+L T
Sbjct: 306 KIKSGQYTFPSPEWDCVSEAAK--DLIRKLLRT 336
>Z72510-1|CAA96651.1| 572|Caenorhabditis elegans Hypothetical
protein F53B7.2 protein.
Length = 572
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = -3
Query: 411 VILCNFSSVIIFGMAPVG----LRPYYRIFRAFQYPVCWH*KVCNIFV 280
+++CNF +I +A + L YY +F F YPV + C +++
Sbjct: 130 LLVCNFFMLIFPVIASMSNSYLLHDYYPVFLWFAYPVGLSTQTCGVYL 177
>Z66514-3|CAA91343.1| 854|Caenorhabditis elegans Hypothetical
protein K01A11.4 protein.
Length = 854
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = -1
Query: 449 ICKYGYSIGTRNE---LFYAISRALLFSVWHQWDFVLTIVYFEPFNTLF 312
I Y Y +G E LFY + R F+ W +W F +++ F+ +F
Sbjct: 400 IFMYAYVMGLALEKGILFYRVGRDGFFAFWWRW-FDAALIFIFLFSLIF 447
>U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astacin
protease protein38 protein.
Length = 745
Score = 27.1 bits (57), Expect = 8.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 276 WQQKYCILFNASKQGIERLEIYD 344
WQQ C+ F ++RLE +D
Sbjct: 153 WQQHTCLRFEEGGPNVDRLEFFD 175
>AY342006-1|AAQ22724.1| 854|Caenorhabditis elegans TRP-3 channel
protein protein.
Length = 854
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = -1
Query: 449 ICKYGYSIGTRNE---LFYAISRALLFSVWHQWDFVLTIVYFEPFNTLF 312
I Y Y +G E LFY + R F+ W +W F +++ F+ +F
Sbjct: 400 IFMYAYVMGLALEKGILFYRVGRDGFFAFWWRW-FDAALIFIFLFSLIF 447
>AJ276029-1|CAC81656.1| 854|Caenorhabditis elegans TRP homologous
cation channel proteinprotein.
Length = 854
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = -1
Query: 449 ICKYGYSIGTRNE---LFYAISRALLFSVWHQWDFVLTIVYFEPFNTLF 312
I Y Y +G E LFY + R F+ W +W F +++ F+ +F
Sbjct: 400 IFMYAYVMGLALEKGILFYRVGRDGFFAFWWRW-FDAALIFIFLFSLIF 447
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,416,597
Number of Sequences: 27780
Number of extensions: 226699
Number of successful extensions: 483
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 483
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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