Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_O12
         (557 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022971-11|AAZ32813.1|  265|Caenorhabditis elegans Hypothetical...    30   0.98 
Z49911-11|CAA90135.2|  452|Caenorhabditis elegans Hypothetical p...    29   2.3  
Z36948-6|CAA85414.2|  452|Caenorhabditis elegans Hypothetical pr...    29   2.3  
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl...    28   4.0  
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl...    28   4.0  
U13070-1|AAK67224.1|  730|Caenorhabditis elegans Hypothetical pr...    27   6.9  
Z70206-2|CAA94126.2|  771|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>AF022971-11|AAZ32813.1|  265|Caenorhabditis elegans Hypothetical
           protein C31B8.16 protein.
          Length = 265

 Score = 30.3 bits (65), Expect = 0.98
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +2

Query: 359 LIAMITCVLVMLEMNLSAAITKYYVLVLYTLKRRMRLSXDTLYREYKKYGD 511
           +I    C+L M    L  AI   YVL+ Y L+R+       +Y++ K++ D
Sbjct: 139 MIIAFACILFMSLGLLLIAICILYVLIYYELQRQEMYMAKEIYKQNKEFID 189


>Z49911-11|CAA90135.2|  452|Caenorhabditis elegans Hypothetical
           protein D2089.1a protein.
          Length = 452

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +1

Query: 166 DRDRDRITVKIRNMK-RSSSRDSMPRS-KRTRS 258
           DRDRDR   + R+ K RS SRD+  R  KR+RS
Sbjct: 317 DRDRDRKRSRSRDRKRRSRSRDNKDRDRKRSRS 349


>Z36948-6|CAA85414.2|  452|Caenorhabditis elegans Hypothetical
           protein D2089.1a protein.
          Length = 452

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +1

Query: 166 DRDRDRITVKIRNMK-RSSSRDSMPRS-KRTRS 258
           DRDRDR   + R+ K RS SRD+  R  KR+RS
Sbjct: 317 DRDRDRKRSRSRDRKRRSRSRDNKDRDRKRSRS 349


>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
            methyltransferase-likeprotein 1, isoform b protein.
          Length = 1590

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +1

Query: 157  PRSDRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDDSS 285
            P+S RDR++   K R   R   RD    SK   S  G  + SS
Sbjct: 1454 PKSSRDREKDREKSREKDRERDRDRREGSKHRDSYHGHRNGSS 1496


>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
            methyltransferase-likeprotein 1, isoform a protein.
          Length = 1604

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +1

Query: 157  PRSDRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDDSS 285
            P+S RDR++   K R   R   RD    SK   S  G  + SS
Sbjct: 1468 PKSSRDREKDREKSREKDRERDRDRREGSKHRDSYHGHRNGSS 1510


>U13070-1|AAK67224.1|  730|Caenorhabditis elegans Hypothetical
           protein F01F1.7 protein.
          Length = 730

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +1

Query: 151 GLPR-SDRDRDRITVKIRNMKRSSSRDSMPRSKRTRS 258
           GL R +DRDRDR   + R+ +R     S  R +R RS
Sbjct: 76  GLDRGNDRDRDRERERDRDRRRDRRERSGSRDRRRRS 112


>Z70206-2|CAA94126.2|  771|Caenorhabditis elegans Hypothetical
           protein C49F8.2 protein.
          Length = 771

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 23/83 (27%), Positives = 34/83 (40%)
 Frame = -3

Query: 522 FILKSPYFLYSLYKVSXDNLIRRFRV*STNT*YFVIAADRFISSITRTHVIIAMR*HIST 343
           FIL  PY  +  Y+ S D L  +      N  Y+ I    FIS +    +    R HI+T
Sbjct: 561 FILDVPYVCF--YEYSIDTL--KMEESEANYIYYSIGISNFISVLLFGTLADWTRKHITT 616

Query: 342 ARARGAYSTSYSFRASTLVRAIV 274
             A        +   ST + ++V
Sbjct: 617 IYASSMVGVGITIMFSTRINSLV 639


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,038,846
Number of Sequences: 27780
Number of extensions: 178519
Number of successful extensions: 540
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 538
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)