Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_O09
         (336 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   1.3  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   1.3  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   3.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   3.0  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    20   7.0  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    20   9.2  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
 Frame = +1

Query: 268 PFG*REKIAGFPKR--XPRASP 327
           PF   EK+ GFP+R   PR  P
Sbjct: 592 PFTYSEKMLGFPERLILPRGKP 613


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
 Frame = +1

Query: 268 PFG*REKIAGFPKR--XPRASP 327
           PF   EK+ GFP+R   PR  P
Sbjct: 592 PFTYSEKMLGFPERLILPRGKP 613


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 235 RPWGXXTWKG 206
           +PWG  TW G
Sbjct: 556 QPWGPFTWGG 565


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +3

Query: 201 G*PFQVXXPHGRFKGXVKVQDESFW 275
           G PFQ+   HG  +  +  +D   W
Sbjct: 104 GKPFQIRMKHGLIRDLIVDRDVPTW 128


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 250 TLPLKRPWGXXTWKG 206
           T+P+K   G  TW G
Sbjct: 409 TIPVKSSEGIQTWDG 423


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = +2

Query: 83  MSKIGINGFGRI 118
           ++ +G+ GFGR+
Sbjct: 370 LATLGVGGFGRV 381


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,756
Number of Sequences: 438
Number of extensions: 2478
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7591023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)