Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_O08
         (466 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0146 - 953957-956278,956468-956786,957185-957213                 34   0.065
01_05_0714 + 24555494-24555637,24555884-24556071,24556195-245562...    29   2.4  
10_08_0259 + 16274430-16274747,16275180-16275242,16275329-162754...    28   4.3  
11_04_0364 - 16791774-16792490,16792545-16793561,16793856-167939...    27   7.4  
10_08_0443 + 17959966-17960185,17960251-17960354,17960682-17960762     27   7.4  
01_06_1834 + 40214378-40214563,40214728-40214818,40215006-402150...    27   7.4  

>05_01_0146 - 953957-956278,956468-956786,957185-957213
          Length = 889

 Score = 33.9 bits (74), Expect = 0.065
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = +3

Query: 111 NLDKVTYIKNRIKMETDIPAHVEETSSSDTFVHRLKELSQEEIKLLQ 251
           N D     KN  K+E ++  + EE  S +T + RL + S+EEI  LQ
Sbjct: 558 NYDITCLRKNVDKLEAEVNKYREECESKETDIVRLNKQSEEEISALQ 604


>01_05_0714 +
           24555494-24555637,24555884-24556071,24556195-24556280,
           24556359-24556461,24556798-24557000,24557077-24557681,
           24557784-24557918,24558040-24558067,24559517-24559596,
           24559873-24559975,24560553-24560635,24560915-24561017,
           24561596-24561720,24562001-24562103,24562647-24562726,
           24563322-24563429,24563521-24563565
          Length = 773

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +3

Query: 141 RIKMETDIPAHVEETSSSDTFVHRLKELSQEEI-KLLQNQNTRLVPEAKATRLEKDAKR 314
           R K ETD P H  ET   DT      E+ +  I KL  +++  L P     +  K+ K+
Sbjct: 553 RGKRETDNPIHTSETPPMDTNPQNQSEIHRGSIEKLAVDKSNALSPSKGKEQRGKNKKQ 611


>10_08_0259 +
           16274430-16274747,16275180-16275242,16275329-16275424,
           16275526-16275618,16276415-16276605,16276684-16276921,
           16277805-16277900,16278324-16278404,16278532-16278939,
           16279048-16279331,16279460-16279547,16279630-16279830,
           16280032-16280118,16280119-16280238,16280536-16280708,
           16281914-16282055,16282292-16282414,16282601-16282656,
           16282735-16283038,16283154-16283283,16283491-16283549,
           16283829-16284061,16285480-16285527,16285765-16285843,
           16285925-16286169,16286338-16286722
          Length = 1446

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +3

Query: 174 VEETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAKATRLEKDAKRH 317
           VEE +  +  V  +K + + E+  +Q +  R VPE    ++ K  +RH
Sbjct: 334 VEEIAEVEGAVSDIKGVDEIELSEVQRRKYRKVPEEDDAKMTKRLQRH 381


>11_04_0364 -
           16791774-16792490,16792545-16793561,16793856-16793920,
           16794787-16796964,16797065-16797322,16799815-16800172
          Length = 1530

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
 Frame = +3

Query: 147 KMETDIPAH--VEETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAKATRLEKDAKRHW 320
           K+ + +PA   +  +SS+   V + +E   E++++L+    R+     AT   KDA++HW
Sbjct: 16  KLSSILPARSLLASSSSAAAMVRQGQEQDLEDLRMLERTMHRI----HATL--KDAEQHW 69

Query: 321 DL 326
           D+
Sbjct: 70  DI 71


>10_08_0443 + 17959966-17960185,17960251-17960354,17960682-17960762
          Length = 134

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 19/64 (29%), Positives = 31/64 (48%)
 Frame = +3

Query: 165 PAHVEETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAKATRLEKDAKRHWDLFYKRNE 344
           P  +E    S   +  LKE +  E+ LLQ+  T++   + ATRLE  +    DL  +   
Sbjct: 4   PPRIEVEKLSVEQLKALKEQTDLEVNLLQDSLTKI--RSAATRLENASAALHDLSLRPKG 61

Query: 345 TNSS 356
           T ++
Sbjct: 62  TTTT 65


>01_06_1834 +
           40214378-40214563,40214728-40214818,40215006-40215093,
           40215444-40215695,40215927-40216101,40216243-40216329,
           40216445-40216513,40216638-40216734,40217010-40217092,
           40217373-40217480,40217672-40217793,40217921-40218028,
           40218121-40218194,40218492-40218617,40219655-40219722,
           40219930-40220079,40220164-40220214,40220678-40220734,
           40220824-40220970,40221064-40221155,40221516-40221625,
           40221728-40221791,40221883-40222032,40222554-40222788
          Length = 929

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = +3

Query: 318 WDLFYKRNETNSSGDRH---WTTRAIILXKKSYPNFH 419
           W+ + ++N+    G R    WT+  +++  +SYP  H
Sbjct: 815 WENYDQKNKGKGKGARSFTGWTSLVVLIMGESYPTLH 851


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,815,741
Number of Sequences: 37544
Number of extensions: 182076
Number of successful extensions: 463
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 931320312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)