Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_O08
         (466 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35604-5|CAA84680.2|  269|Caenorhabditis elegans Hypothetical pr...    45   2e-05
AL132949-36|CAJ58501.1|  311|Caenorhabditis elegans Hypothetical...    41   5e-04
L23648-6|AAA28032.2|  390|Caenorhabditis elegans Hypothetical pr...    28   2.9  
Z81140-2|CAB03486.1|  581|Caenorhabditis elegans Hypothetical pr...    28   3.8  
Z78060-5|CAB01492.1|  216|Caenorhabditis elegans Hypothetical pr...    28   3.8  
X70835-1|CAA50183.1|  581|Caenorhabditis elegans Cytoplasmic int...    28   3.8  
AL022271-2|CAA18350.1|  216|Caenorhabditis elegans Hypothetical ...    28   3.8  
Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical pr...    27   5.0  
Z78544-2|CAB01758.1|  368|Caenorhabditis elegans Hypothetical pr...    27   5.0  
AC006790-14|AAY55891.1|  173|Caenorhabditis elegans Hypothetical...    27   5.0  

>Z35604-5|CAA84680.2|  269|Caenorhabditis elegans Hypothetical
           protein ZK1058.5 protein.
          Length = 269

 Score = 45.2 bits (102), Expect = 2e-05
 Identities = 19/53 (35%), Positives = 35/53 (66%)
 Frame = +3

Query: 216 KELSQEEIKLLQNQNTRLVPEAKATRLEKDAKRHWDLFYKRNETNSSGDRHWT 374
           +EL++++ + L  Q +  + + K  +LE DA+++WD FY RN+ N   DR+W+
Sbjct: 14  RELTEDDHEKLAKQTS--ISDFKRNKLEIDARKNWDKFYHRNKNNFFKDRNWS 64


>AL132949-36|CAJ58501.1|  311|Caenorhabditis elegans Hypothetical
           protein Y53F4B.42 protein.
          Length = 311

 Score = 40.7 bits (91), Expect = 5e-04
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = +3

Query: 219 ELSQEEIKLLQNQNTRLVPEAKATRLEKDAKRHWDLFYKRNETNSSGDRHW 371
           E  +E  +++Q Q +  V E KA RL       WD FY  NE     DR+W
Sbjct: 48  EQQEEAQRIVQGQKSMKVDEEKAMRLLSTPADQWDAFYAHNENRFFKDRNW 98


>L23648-6|AAA28032.2|  390|Caenorhabditis elegans Hypothetical
           protein F44B9.5 protein.
          Length = 390

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 20/93 (21%), Positives = 36/93 (38%)
 Frame = +3

Query: 180 ETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAKATRLEKDAKRHWDLFYKRNETNSSG 359
           E  S + F  R+ E     +K+  ++         A RL  D +R   +  +   +    
Sbjct: 242 ENESLEEFTARVAETLAGNLKIAVSKFGISDATEAAKRLRTDRERAKKVVVREKTSPRLA 301

Query: 360 DRHWTTRAIILXKKSYPNFHLMLVHDPPEHVRA 458
           D        +  K+S+P+FHL  +    E  R+
Sbjct: 302 DPRQMDECAMRIKQSFPSFHLSAIRRDLEKTRS 334


>Z81140-2|CAB03486.1|  581|Caenorhabditis elegans Hypothetical
           protein W10G6.3 protein.
          Length = 581

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 15/57 (26%), Positives = 30/57 (52%)
 Frame = +3

Query: 135 KNRIKMETDIPAHVEETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAKATRLEKD 305
           ++R+K++ D+   +    +    + R   L +EE+  L+ +N RL  E +  R+E D
Sbjct: 169 EDRLKID-DLLVTLSNLEAEINLLKRRIALLEEEVARLKKENFRLTSELQRVRIELD 224


>Z78060-5|CAB01492.1|  216|Caenorhabditis elegans Hypothetical
           protein C34D1.5 protein.
          Length = 216

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
 Frame = +3

Query: 105 LHNLDKVTYIKNRIKMETD-IPAHVEETSSSDTFV--HRLKELSQ--EEIKLLQNQNTRL 269
           L N +     + +IK +TD +   +   ++ +  +  HR++ LSQ  E++++L+N  +R 
Sbjct: 116 LRNTEAARRCREKIKRKTDDLETELTRLTARNEVMNQHRIRLLSQVEEQMRMLENIKSR- 174

Query: 270 VPEAKATRLEKDAKRHWDLFYKRNET 347
            PE +A  +  +AK+  D +  + ET
Sbjct: 175 NPELEA-EIRYEAKKIVDTYTHQVET 199


>X70835-1|CAA50183.1|  581|Caenorhabditis elegans Cytoplasmic
           intermediate filament(IF) protein protein.
          Length = 581

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 15/57 (26%), Positives = 30/57 (52%)
 Frame = +3

Query: 135 KNRIKMETDIPAHVEETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAKATRLEKD 305
           ++R+K++ D+   +    +    + R   L +EE+  L+ +N RL  E +  R+E D
Sbjct: 169 EDRLKID-DLLVTLSNLEAEINLLKRRIALLEEEVARLKKENFRLTSELQRVRIELD 224


>AL022271-2|CAA18350.1|  216|Caenorhabditis elegans Hypothetical
           protein C34D1.5 protein.
          Length = 216

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
 Frame = +3

Query: 105 LHNLDKVTYIKNRIKMETD-IPAHVEETSSSDTFV--HRLKELSQ--EEIKLLQNQNTRL 269
           L N +     + +IK +TD +   +   ++ +  +  HR++ LSQ  E++++L+N  +R 
Sbjct: 116 LRNTEAARRCREKIKRKTDDLETELTRLTARNEVMNQHRIRLLSQVEEQMRMLENIKSR- 174

Query: 270 VPEAKATRLEKDAKRHWDLFYKRNET 347
            PE +A  +  +AK+  D +  + ET
Sbjct: 175 NPELEA-EIRYEAKKIVDTYTHQVET 199


>Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical
           protein Y70C5A.2 protein.
          Length = 1037

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 14/54 (25%), Positives = 26/54 (48%)
 Frame = +3

Query: 132 IKNRIKMETDIPAHVEETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAKATR 293
           +  R  +ET +  +  E  S    + RL E  ++E  + QNQN    P++  ++
Sbjct: 597 VNTRKVLETSVGEYFIEYFSKTLCIRRLLEKEEKECDIEQNQNESPEPDSSLSQ 650


>Z78544-2|CAB01758.1|  368|Caenorhabditis elegans Hypothetical
           protein K04G11.3 protein.
          Length = 368

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
 Frame = +3

Query: 186 SSSDTFVHRLKELSQEEIKL---LQNQNTRLVPEAKATRLEKDAKR 314
           S+++  ++RLK+  +EEI+L   L  +NTRL  E  + +   +A R
Sbjct: 249 STNEIEINRLKKCVEEEIELNRQLIAENTRLATEQVSVKRNMEAAR 294


>AC006790-14|AAY55891.1|  173|Caenorhabditis elegans Hypothetical
           protein Y49F6B.14 protein.
          Length = 173

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 332 QKKRNKFFRGPALDYTSYYFTEEELPKLSPNAGS 433
           Q  RN+   GP +D T+YY  EE+    S + GS
Sbjct: 14  QGSRNRG-NGPCVDLTTYYSVEEDYDGKSDDEGS 46


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,692,637
Number of Sequences: 27780
Number of extensions: 179073
Number of successful extensions: 554
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)