Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_N23
         (646 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128348-1|BAC87394.1|  129|Homo sapiens protein ( Homo sapiens ...    44   5e-04

>AK128348-1|BAC87394.1|  129|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46490 fis, clone THYMU3027540. ).
          Length = 129

 Score = 44.0 bits (99), Expect = 5e-04
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = -1

Query: 409 ITHXVMYLTHXVMYLTHXVMYLTHTYVYILFVY 311
           ITH  MY+TH  +Y TH  +Y TH YVY  ++Y
Sbjct: 15  ITHICMYITHICVYQTHVCVYHTHMYVYHTYMY 47



 Score = 41.5 bits (93), Expect = 0.002
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -1

Query: 406 THXVMYLTHXVMYLTHXVMYLTHTYVYILFVYCQI 302
           T+  +Y TH  MY+TH  MY+TH YV I  +Y  +
Sbjct: 44  TYMYVYHTHICMYITHICMYITHIYVCISHIYMYV 78



 Score = 41.5 bits (93), Expect = 0.002
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = -1

Query: 406 THXVMYLTHXVMYLTHXVMYLTHTYVYILFVY 311
           TH  MY+TH  MY+TH  + ++H Y+Y+   Y
Sbjct: 51  THICMYITHICMYITHIYVCISHIYMYVYHAY 82



 Score = 39.9 bits (89), Expect = 0.008
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -1

Query: 409 ITHXVMYLTHXVMYLTHXVMYLTHTYVYILFVY 311
           I+H  +Y+TH  MY+TH  +Y TH  VY   +Y
Sbjct: 8   ISHTYVYITHICMYITHICVYQTHVCVYHTHMY 40



 Score = 37.1 bits (82), Expect = 0.053
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = -1

Query: 406 THXVMYLTHXVMYLTHXVMYLTHTYVYILFVYCQIA 299
           TH  +Y T+  +Y TH  MY+TH  +YI  +Y  I+
Sbjct: 37  THMYVYHTYMYVYHTHICMYITHICMYITHIYVCIS 72



 Score = 36.3 bits (80), Expect = 0.093
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 409 ITHXVMYLTHXVMYLTHXVMYLTHTYVYILFVY 311
           ITH  MY+TH  + ++H  MY+ H Y+ +   Y
Sbjct: 57  ITHICMYITHIYVCISHIYMYVYHAYMCMYITY 89



 Score = 35.9 bits (79), Expect = 0.12
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -1

Query: 409 ITHXVMYLTHXVMYLTHXVMYLTHTYVYI 323
           ITH  +Y TH  +Y TH  MY+ HTY+Y+
Sbjct: 22  ITHICVYQTHVCVYHTH--MYVYHTYMYV 48



 Score = 32.3 bits (70), Expect = 1.5
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 397 VMYLTHXVMYLTHXVMYLTHTYVY 326
           V+ ++H  +Y+TH  MY+TH  VY
Sbjct: 5   VLCISHTYVYITHICMYITHICVY 28



 Score = 30.3 bits (65), Expect = 6.1
 Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
 Frame = -3

Query: 410 HYTXCHVFDTXCHVFDTXCHVFDTHICIYT--LCL-LSNCLIC 291
           + T   V+ T  +V+ T  +V+ THIC+Y   +C+ +++  +C
Sbjct: 28  YQTHVCVYHTHMYVYHTYMYVYHTHICMYITHICMYITHIYVC 70



 Score = 30.3 bits (65), Expect = 6.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 406 THXVMYLTHXVMYLTHXVMYLTHTYVYILFV 314
           TH  +Y TH  +Y T+  +Y TH  +YI  +
Sbjct: 30  THVCVYHTHMYVYHTYMYVYHTHICMYITHI 60


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,322,561
Number of Sequences: 237096
Number of extensions: 1159759
Number of successful extensions: 6128
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 6034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6113
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)