Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_N23
         (646 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80846-2|AAC70887.3|  516|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U88170-9|AAB42243.2|  348|Caenorhabditis elegans Serpentine rece...    28   6.5  
AL032631-15|CAA21579.1|  137|Caenorhabditis elegans Hypothetical...    27   8.6  

>U80846-2|AAC70887.3|  516|Caenorhabditis elegans Hypothetical
           protein K06A9.2 protein.
          Length = 516

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 398 CHVFDTXCHVFDTXCHVFDTHICI 327
           C VFDT  HVF T   + D+ +C+
Sbjct: 367 CTVFDTVDHVFRTGASLVDSSMCL 390


>U88170-9|AAB42243.2|  348|Caenorhabditis elegans Serpentine
           receptor, class h protein51 protein.
          Length = 348

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 11/45 (24%), Positives = 25/45 (55%)
 Frame = -1

Query: 589 IVTSIYILIREVKTLYPFLRKLREPEEYEISHTYRVYRGVQNAII 455
           + T ++    +V+    FLR+   P EY++   + V+ G+ +++I
Sbjct: 86  LTTPVHFFPAQVRCSNGFLRQFGVPPEYQVYIVHFVFSGIVSSVI 130


>AL032631-15|CAA21579.1|  137|Caenorhabditis elegans Hypothetical
           protein Y106G6H.16 protein.
          Length = 137

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = -2

Query: 480 IEECRMLLFFRRM--HKKYIKSIKXTLHTLSCI*HTLSCI*HTLSCI*HTHMYIYSL 316
           ++  RM  F R    +KK I +IK   ++ SC+  T+  I  TL C+   H Y   L
Sbjct: 72  VQSIRMRHFTRSPTENKKIINTIKVQPNSSSCLRCTVLIIIFTLLCLIAYHFYFLRL 128


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,608,956
Number of Sequences: 27780
Number of extensions: 208101
Number of successful extensions: 458
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 456
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)