Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_N07
(641 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna replic... 136 1e-32
L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical p... 121 4e-28
AF036699-3|AAB88360.1| 334|Caenorhabditis elegans Rfc (dna repl... 109 2e-24
Z70307-13|CAA94339.1| 354|Caenorhabditis elegans Hypothetical p... 44 7e-05
Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical pr... 36 0.033
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 34 0.075
Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical p... 34 0.099
Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical p... 34 0.099
Z81484-9|CAE11297.1| 325|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 31 0.93
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 31 0.93
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 31 0.93
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 31 0.93
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 31 0.93
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 31 0.93
Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 30 1.2
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 30 1.2
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical ... 30 1.6
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 29 2.1
AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical ... 29 2.8
AF003145-9|AAT68904.1| 585|Caenorhabditis elegans Hypothetical ... 29 2.8
AF003145-8|AAB57721.2| 700|Caenorhabditis elegans Hypothetical ... 29 2.8
Z92785-2|CAB07200.1| 344|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 29 3.7
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 29 3.7
Z93385-5|CAB07639.1| 734|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical pr... 28 4.9
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 28 4.9
U40413-4|AAM51516.1| 699|Caenorhabditis elegans Hypothetical pr... 28 4.9
U40413-3|AAK39176.1| 673|Caenorhabditis elegans Hypothetical pr... 28 4.9
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 28 4.9
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 28 4.9
Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical pr... 28 6.5
U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical pr... 28 6.5
AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical ... 28 6.5
AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical... 28 6.5
AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical... 28 6.5
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 27 8.6
>U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 4 protein.
Length = 334
Score = 136 bits (329), Expect = 1e-32
Identities = 71/134 (52%), Positives = 90/134 (67%), Gaps = 1/134 (0%)
Frame = +2
Query: 239 EVVQVLRECLSGGDLPHLLFYGPPGTGKTSAILAAAKQLF-GDISRDRVLELNASDERGI 415
EVV +L+ L G DLPHLLFYGPPGTGKTSA LA +QLF +I DRVL+LNASDERGI
Sbjct: 34 EVVTMLKGALQGRDLPHLLFYGPPGTGKTSAALAFCRQLFPKNIFHDRVLDLNASDERGI 93
Query: 416 QVVRDKVKAFAQLTVSGKRADGRPCPSYKLVILDEADSMTTAAQAALXXXXXXXXXXXXF 595
VVR K+++F++ ++ + K++ILDE D+MT AQAA+ F
Sbjct: 94 AVVRQKIQSFSKSSLGHSHRE--DVLKLKIIILDEVDAMTREAQAAMRRVIEDFSKTTRF 151
Query: 596 CLICNYVSXIIPPI 637
LICNYVS +IPP+
Sbjct: 152 ILICNYVSRLIPPV 165
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +1
Query: 151 VKTTNKKKPPAPWVEKYRPKTIDDIVDQGRGCSSAKG 261
++ NK+ W EKYRPKT+DDI Q + KG
Sbjct: 5 MEVDNKRPKVLTWTEKYRPKTLDDIAYQDEVVTMLKG 41
>L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical
protein F44B9.8 protein.
Length = 368
Score = 121 bits (292), Expect = 4e-28
Identities = 66/137 (48%), Positives = 86/137 (62%), Gaps = 4/137 (2%)
Frame = +2
Query: 239 EVVQVLRECLSGGDLPHLLFYGPPGTGKTSAILAAAKQLFGDIS-RDRVLELNASDERGI 415
++V+ L + + LPHLLFYGPPGTGKT+ +LAAA+Q++ VLELNASDERGI
Sbjct: 48 QIVKTLTKFIENRTLPHLLFYGPPGTGKTTTVLAAARQMYSPTKMASMVLELNASDERGI 107
Query: 416 QVVRDKVKAFAQ---LTVSGKRADGRPCPSYKLVILDEADSMTTAAQAALXXXXXXXXXX 586
VVR+ + FAQ L ++ P +KLVILDEAD+MT AQ AL
Sbjct: 108 DVVRNTIVNFAQTKGLQAFSTSSNTGTVP-FKLVILDEADAMTKDAQNALRRVIEKYTDN 166
Query: 587 XXFCLICNYVSXIIPPI 637
FC+ICNY++ I+P I
Sbjct: 167 VRFCIICNYLASIVPAI 183
Score = 31.5 bits (68), Expect = 0.53
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 154 KTTNKKKPPAPWVEKYRPKTIDDIV 228
K T PWVEKYRP +D++V
Sbjct: 20 KMTTTTASNLPWVEKYRPSKLDELV 44
>AF036699-3|AAB88360.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 2 protein.
Length = 334
Score = 109 bits (261), Expect = 2e-24
Identities = 60/132 (45%), Positives = 82/132 (62%)
Frame = +2
Query: 242 VVQVLRECLSGGDLPHLLFYGPPGTGKTSAILAAAKQLFGDISRDRVLELNASDERGIQV 421
+V+ L+ G++P+++ GPPG GKT+++ A A++L GD ++ VLELNASDERGI V
Sbjct: 30 IVERLKVIGHEGNVPNIVLSGPPGCGKTTSVWALARELLGDKVKEAVLELNASDERGIDV 89
Query: 422 VRDKVKAFAQLTVSGKRADGRPCPSYKLVILDEADSMTTAAQAALXXXXXXXXXXXXFCL 601
VR ++K FAQ V+ +GR +K++ILDEADSMT AQ AL F L
Sbjct: 90 VRHRIKTFAQTKVT--LPEGR----HKIIILDEADSMTDGAQQALRRTMEMYTKTTRFAL 143
Query: 602 ICNYVSXIIPPI 637
CN II PI
Sbjct: 144 ACNQSEKIIEPI 155
Score = 35.5 bits (78), Expect = 0.033
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +1
Query: 163 NKKKPPAPWVEKYRPKTIDDIV 228
++K+ APWVEKYRPK + DIV
Sbjct: 4 SEKQQLAPWVEKYRPKVLADIV 25
>Z70307-13|CAA94339.1| 354|Caenorhabditis elegans Hypothetical
protein C39E9.13 protein.
Length = 354
Score = 44.4 bits (100), Expect = 7e-05
Identities = 46/151 (30%), Positives = 65/151 (43%), Gaps = 27/151 (17%)
Frame = +2
Query: 266 LSGGDLPHLLFYGPPGTGKTSAILAAAKQLFG------------------------DISR 373
LS +PHLLF GP G GK + I ++L+G +S
Sbjct: 32 LSADCMPHLLFCGPSGAGKKTRIKCLLRELYGVGVEKTQLIMKSFTSPSNKKLEIQTVSS 91
Query: 374 DRVLELNASDERGIQ---VVRDKVKAFAQLTVSGKRADGRPCPSYKLVILDEADSMTTAA 544
+ +E+ SD GI VV+D VK AQ + + + S+K+V+L EADS+T A
Sbjct: 92 NYHIEMTPSDV-GIYDRVVVQDLVKEMAQTS----QIESTSQRSFKVVVLCEADSLTRDA 146
Query: 545 QAALXXXXXXXXXXXXFCLICNYVSXIIPPI 637
Q L L C +S II P+
Sbjct: 147 QHGLRRTMEKYANNCKIVLSCESLSRIIEPL 177
>Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical
protein C54G10.2 protein.
Length = 839
Score = 35.5 bits (78), Expect = 0.033
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +1
Query: 109 TGKISAGDKASTSGVKTTNKKKPPAP---WVEKYRPKTIDDIVDQGRGCSSAKGMFIRW 276
T + S+ + STS V K P P WV+KY+PK + ++V Q G S + W
Sbjct: 251 TSESSSSSQVSTSSVVFQPKPSGPPPALSWVDKYKPKRMGELVGQ-NGDKSPINKLLEW 308
Score = 28.3 bits (60), Expect = 4.9
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Frame = +2
Query: 293 LFYGPPGTGKTSAILAAAKQLFGDISRDRVLELNASDERGIQVVRDKVKAFA------QL 454
L G PG GKT+ A +QL +++E+NASD R + + K+ + Q
Sbjct: 344 LLSGSPGVGKTTCAYMACQQL-----GLQLVEMNASDVRSKKHLEAKIGELSGSHQIEQF 398
Query: 455 TVSGKRADGRPCPSYKLVILDEADSMT 535
+ K A + ++I+DE D M+
Sbjct: 399 FGAKKCAPQDNQKVHHILIMDEVDGMS 425
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 34.3 bits (75), Expect = 0.075
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +2
Query: 290 LLFYGPPGTGKT---SAILAAAKQLFGDISRDRVLELNASDERGIQVVRD 430
+L YGPPGTGKT A+ A K F ++ +++++ D G ++VRD
Sbjct: 214 VLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGD--GAKLVRD 261
>Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical
protein F54C9.6b protein.
Length = 396
Score = 33.9 bits (74), Expect = 0.099
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 293 LFYGPPGTGKTSAILAAAKQLFGDISRDRVLELNASDER 409
LFYGPPGTGK+S I A A + + E D+R
Sbjct: 201 LFYGPPGTGKSSFISALASHFGYSVCLLSLSERTLDDDR 239
>Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical
protein F54C9.6a protein.
Length = 442
Score = 33.9 bits (74), Expect = 0.099
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 293 LFYGPPGTGKTSAILAAAKQLFGDISRDRVLELNASDER 409
LFYGPPGTGK+S I A A + + E D+R
Sbjct: 247 LFYGPPGTGKSSFISALASHFGYSVCLLSLSERTLDDDR 285
>Z81484-9|CAE11297.1| 325|Caenorhabditis elegans Hypothetical
protein C47A10.10 protein.
Length = 325
Score = 32.7 bits (71), Expect = 0.23
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = -1
Query: 254 ALEQPLPWSTISSIVFGLYFSTHGAGGFFLFVVLTPEV 141
AL P +STI I+ GL F H GG+ + +V TPEV
Sbjct: 5 ALSSPYTYSTILFIIAGLSFPIHLFGGYCI-LVKTPEV 41
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 30.7 bits (66), Expect = 0.93
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 290 LLFYGPPGTGKTSAILAAAKQ 352
++FYGPPGTGKT A A +
Sbjct: 428 VVFYGPPGTGKTLVARALANE 448
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 30.7 bits (66), Expect = 0.93
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 290 LLFYGPPGTGKTSAILAAAKQ 352
++FYGPPGTGKT A A +
Sbjct: 426 VVFYGPPGTGKTLVARALANE 446
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 30.7 bits (66), Expect = 0.93
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 290 LLFYGPPGTGKTSAILAAAKQ 352
++FYGPPGTGKT A A +
Sbjct: 428 VVFYGPPGTGKTLVARALANE 448
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 30.7 bits (66), Expect = 0.93
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 290 LLFYGPPGTGKTSAILAAAKQ 352
++FYGPPGTGKT A A +
Sbjct: 428 VVFYGPPGTGKTLVARALANE 448
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 30.7 bits (66), Expect = 0.93
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 290 LLFYGPPGTGKTSAILAAAKQ 352
++FYGPPGTGKT A A +
Sbjct: 426 VVFYGPPGTGKTLVARALANE 446
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 30.7 bits (66), Expect = 0.93
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 290 LLFYGPPGTGKTSAILAAAKQ 352
++FYGPPGTGKT A A +
Sbjct: 428 VVFYGPPGTGKTLVARALANE 448
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 30.7 bits (66), Expect = 0.93
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +2
Query: 290 LLFYGPPGTGKTSAILAAAKQL---FGDISRDRVLEL-NASDERGIQVVRDKVKAFA 448
+LFYGPPG GKT A A + F I +L + E ++ V DK +A A
Sbjct: 520 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAA 576
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 290 LLFYGPPGTGKTSAILAAAKQ 352
+L +GPPGTGKT A A +
Sbjct: 247 ILLFGPPGTGKTLIARAVANE 267
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 30.7 bits (66), Expect = 0.93
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +2
Query: 290 LLFYGPPGTGKTSAILAAAKQL---FGDISRDRVLEL-NASDERGIQVVRDKVKAFA 448
+LFYGPPG GKT A A + F I +L + E ++ V DK +A A
Sbjct: 519 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAA 575
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 290 LLFYGPPGTGKTSAILAAAKQ 352
+L +GPPGTGKT A A +
Sbjct: 246 ILLFGPPGTGKTLIARAVANE 266
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 30.7 bits (66), Expect = 0.93
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +2
Query: 290 LLFYGPPGTGKTSAILAAAKQL---FGDISRDRVLEL-NASDERGIQVVRDKVKAFA 448
+LFYGPPG GKT A A + F I +L + E ++ V DK +A A
Sbjct: 519 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAA 575
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 290 LLFYGPPGTGKTSAILAAAKQ 352
+L +GPPGTGKT A A +
Sbjct: 246 ILLFGPPGTGKTLIARAVANE 266
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 30.7 bits (66), Expect = 0.93
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Frame = +2
Query: 290 LLFYGPPGTGKT---SAILAAAKQLFGDIS 370
+L +GPPG GKT A+ +KQ+F +IS
Sbjct: 214 ILLFGPPGNGKTLLAKAVAGESKQMFFNIS 243
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 30.7 bits (66), Expect = 0.93
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 290 LLFYGPPGTGKTSAILAAAKQ 352
++FYGPPGTGKT A A +
Sbjct: 428 VVFYGPPGTGKTLVARALANE 448
>Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical
protein F54B3.3 protein.
Length = 595
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 269 SGGDLPHLLFYGPPGTGKT 325
+ G +++FYGPPGTGKT
Sbjct: 338 NNGLFRNVMFYGPPGTGKT 356
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 293 LFYGPPGTGKTSAILAAAKQL 355
L +GPPGTGKT A A QL
Sbjct: 180 LLFGPPGTGKTLLARAVASQL 200
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 293 LFYGPPGTGKTSAILAAAKQL 355
L +GPPGTGKT A A QL
Sbjct: 188 LLFGPPGTGKTLLARAVASQL 208
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical
protein C27H6.2 protein.
Length = 458
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 242 VVQVLR-ECLSGGDLPHLLFYGPPGTGKTSAILAAAKQLFGD 364
VV ++R +C++G + L GPP TGKT+ LA +++L GD
Sbjct: 71 VVDMIRLKCMAGRAV---LIAGPPATGKTAIALAMSQEL-GD 108
>AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical
protein C34B2.6 protein.
Length = 971
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2
Query: 245 VQVLRECLSGGDLPHLLFYGPPGTGKTSAILAAAKQL 355
V +LR+ + GG + L F+GPPG GKTS + A L
Sbjct: 496 VNLLRKSI-GGKI--LCFHGPPGVGKTSIAKSIATAL 529
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 290 LLFYGPPGTGKTSAILAAAKQ 352
+L YGPPGTGKT A A +
Sbjct: 214 VLLYGPPGTGKTLCARAVANR 234
>AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical
protein Y80D3A.2 protein.
Length = 1467
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 260 ECLSGGDLPHL-LFYGPPGTGKTSAILAAAKQLFGDISRDRVLELNASDE 406
E + G P L + GPPGTGKT + ++ + R L + S++
Sbjct: 812 EAIKSGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNWPNQRTLIVTHSNQ 861
>AF003145-9|AAT68904.1| 585|Caenorhabditis elegans Hypothetical
protein B0414.8b protein.
Length = 585
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -1
Query: 389 IPTRGLD*YLRRVALQRQVWHSFYRYPAVHKIVNAVDLHRINIPL 255
I R LD Y R+++ R V P +++NAV H I++ L
Sbjct: 301 IVVRALDRYFRKISTCRYVIPGLDFLPLTIELINAVSKHEIDLSL 345
>AF003145-8|AAB57721.2| 700|Caenorhabditis elegans Hypothetical
protein B0414.8a protein.
Length = 700
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -1
Query: 389 IPTRGLD*YLRRVALQRQVWHSFYRYPAVHKIVNAVDLHRINIPL 255
I R LD Y R+++ R V P +++NAV H I++ L
Sbjct: 301 IVVRALDRYFRKISTCRYVIPGLDFLPLTIELINAVSKHEIDLSL 345
>Z92785-2|CAB07200.1| 344|Caenorhabditis elegans Hypothetical
protein F31E9.4 protein.
Length = 344
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 82 SHKMQAFLKTGKISAGDKASTSGVKTTNKKKPPAPWVEKYRPKTIDD 222
S K+Q F+K+ KI G + G K PW + TI+D
Sbjct: 33 SPKLQQFIKSMKIPTGGFSVFLGAHDRMIKSDQQPWGYSFNKSTIED 79
>Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical
protein K08F4.1 protein.
Length = 850
Score = 28.7 bits (61), Expect = 3.7
Identities = 27/79 (34%), Positives = 38/79 (48%)
Frame = +2
Query: 290 LLFYGPPGTGKTSAILAAAKQLFGDISRDRVLELNASDERGIQVVRDKVKAFAQLTVSGK 469
LL GP G GK++ A+Q + +++NASD R + + +KV A T
Sbjct: 333 LLLSGPAGLGKSTLARIVARQ-----AGYSTIDVNASDARTVADL-NKVLEGAVKTSRTL 386
Query: 470 RADGRPCPSYKLVILDEAD 526
AD RP +ILDE D
Sbjct: 387 DADQRPA----CLILDEID 401
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +2
Query: 272 GGDLPH-LLFYGPPGTGKTSAILAAA 346
GG LP +L GPPGTGKT A A
Sbjct: 230 GGRLPKGVLLVGPPGTGKTLLARAIA 255
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 290 LLFYGPPGTGKTSAILAAA 346
+L YGPPGTGKT A A
Sbjct: 191 VLLYGPPGTGKTLLARAVA 209
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 290 LLFYGPPGTGKTSAILAAA 346
+L YGPPGTGKT A A
Sbjct: 212 VLLYGPPGTGKTLLARAVA 230
>Z93385-5|CAB07639.1| 734|Caenorhabditis elegans Hypothetical
protein M01E5.5b protein.
Length = 734
Score = 28.3 bits (60), Expect = 4.9
Identities = 23/94 (24%), Positives = 41/94 (43%)
Frame = +1
Query: 1 RNSTQSNSTTGQKNCEFQNSEKEITKYSHKMQAFLKTGKISAGDKASTSGVKTTNKKKPP 180
+ S ++N Q++ E + E E ++ + K + K STS KK+PP
Sbjct: 100 KKSKKNNKKKAQESSEDDDEESEGDVSEEDVKPQKRKSKGAEKSKPSTSKKDAGGKKEPP 159
Query: 181 APWVEKYRPKTIDDIVDQGRGCSSAKGMFIRWRS 282
V+K + I+DI + + K ++W S
Sbjct: 160 KKKVKK--EEDIEDIWEWWK--EEKKPAGVKWNS 189
>Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical
protein F10B5.5 protein.
Length = 424
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +2
Query: 290 LLFYGPPGTGKTSAILAAAKQL---FGD-ISRDRVLELNA 397
+L GPPGTGKTS A+ L D S+ +LE+N+
Sbjct: 175 ILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINS 214
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 290 LLFYGPPGTGKTSAILAAAK 349
L+ GPPG+GKT +LAA +
Sbjct: 2533 LVLCGPPGSGKTMTLLAALR 2552
>U40413-4|AAM51516.1| 699|Caenorhabditis elegans Hypothetical
protein C18B2.5b protein.
Length = 699
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Frame = +2
Query: 254 LRECLSGGDLPH------LLFYGPPGTGKTSAILAAAKQLFGDISRD 376
+ + + GGD P LL +GP +GKTSAI + L+ D+ ++
Sbjct: 451 INKVIIGGDAPPSDDDKTLLLFGPVNSGKTSAITSMMNYLY-DVKKE 496
>U40413-3|AAK39176.1| 673|Caenorhabditis elegans Hypothetical
protein C18B2.5a protein.
Length = 673
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Frame = +2
Query: 254 LRECLSGGDLPH------LLFYGPPGTGKTSAILAAAKQLFGDISRD 376
+ + + GGD P LL +GP +GKTSAI + L+ D+ ++
Sbjct: 425 INKVIIGGDAPPSDDDKTLLLFGPVNSGKTSAITSMMNYLY-DVKKE 470
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 290 LLFYGPPGTGKTSAILAAAK 349
L+ GPPG+GKT +LAA +
Sbjct: 2533 LVLCGPPGSGKTMTLLAALR 2552
>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
protein Y53F4B.9 protein.
Length = 1168
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +2
Query: 290 LLFYGPPGTGKTSAILAAAKQLFGDISRDRVLELNASDER-GIQVVRDKVKAFAQLTVSG 466
L+ GP G GKT+ A AKQ R++ + R G ++ R+ +A V
Sbjct: 819 LVLIGPSGVGKTALFRALAKQ-----ENMRIISIGPETGRSGSEIKRNLQEALRSHRVDQ 873
Query: 467 KRADGRPCPSYKLV 508
+ R P YK +
Sbjct: 874 QPHPTRTIPFYKTI 887
>Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 534 LQQLKRHFDALWNARLVLHGSVSSATMCXESYRQ 635
+Q+LK D L A+L +H VSS + Y Q
Sbjct: 310 IQELKDRIDKLTQAQLAIHQLVSSQPFSGDPYNQ 343
>Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 534 LQQLKRHFDALWNARLVLHGSVSSATMCXESYRQ 635
+Q+LK D L A+L +H VSS + Y Q
Sbjct: 308 IQELKDRIDKLTQAQLAIHQLVSSQPFSGDPYNQ 341
>U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical
protein C34F11.5 protein.
Length = 894
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/55 (27%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +2
Query: 17 AIQQQVKKIVNFKIVKRKSLNTLIKCKH---FLRLERYLQETKRQLLELKLQIRK 172
A ++++KK+ K++KRK + +K + + ++ +QE KR+ L K ++R+
Sbjct: 665 AKKKKLKKVDGKKVLKRKEIVLTLKVRKASTAKKTKKAMQEKKRKRLRAKRRLRR 719
>AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical
protein Y75B8A.4 protein.
Length = 773
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 233 KXEVVQVLRECLSGGDLPHLL--FYGPPGTGKTSAILAAAKQL 355
K V++ L C + ++ F GPPG GKTS A A+ +
Sbjct: 311 KERVLEHLAVCKMNNSVKGMILCFTGPPGIGKTSIAKAIAESM 353
>AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 534 LQQLKRHFDALWNARLVLHGSVSSATMCXESYRQ 635
+Q+LK D L A+L +H VSS + Y Q
Sbjct: 310 IQELKDRIDKLTQAQLAIHQLVSSQPFSGDPYNQ 343
>AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 534 LQQLKRHFDALWNARLVLHGSVSSATMCXESYRQ 635
+Q+LK D L A+L +H VSS + Y Q
Sbjct: 308 IQELKDRIDKLTQAQLAIHQLVSSQPFSGDPYNQ 341
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 290 LLFYGPPGTGKTSAILAAAK 349
+L YGPPG GKT A A+
Sbjct: 117 ILLYGPPGCGKTLLAKAVAR 136
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 290 LLFYGPPGTGKTSAILAAAK 349
+L YGPPG GKT A A+
Sbjct: 120 ILLYGPPGCGKTLLAKAVAR 139
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 598 TEPCSTSLAFHSASKCRLSCCSHRVCFIQNDQFV*GTWST 479
TEPC T + + RLSCC ++ +Q + G +T
Sbjct: 1050 TEPCGTGVCYFP----RLSCCPGYTATVEGNQHICGPLTT 1085
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,722,725
Number of Sequences: 27780
Number of extensions: 280229
Number of successful extensions: 1115
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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