Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_N05
(651 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624... 237 4e-63
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407... 234 4e-62
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 230 6e-61
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 31 0.80
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 31 1.1
04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120... 30 1.4
09_06_0320 - 22297579-22297760,22298433-22299358,22299422-222997... 28 5.6
08_02_1331 + 26195949-26196132,26196606-26196710,26197270-261981... 28 5.6
03_02_0491 + 8854438-8854657,8854897-8854942,8855268-8855307,885... 28 5.6
12_02_0957 + 24807261-24807311,24807436-24807773,24808727-248089... 27 9.8
09_06_0319 - 22293869-22293906,22294539-22295808 27 9.8
06_02_0084 - 11547820-11548773 27 9.8
>11_01_0740 +
6243517-6243526,6244822-6245323,6245415-6245496,
6245741-6245821
Length = 224
Score = 237 bits (581), Expect = 4e-63
Identities = 110/158 (69%), Positives = 127/158 (80%)
Frame = +1
Query: 91 PKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLV 270
PKSR+CRGVPDPKIRI+D+G K+ VD+FP CVHLVS E E +SSEALEA RI CNKY+
Sbjct: 18 PKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMT 77
Query: 271 KNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMS 450
KN GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQ ++S
Sbjct: 78 KNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLS 137
Query: 451 VRSSDRWKAQVIEALRRAKFKFPGTSKDLRIKEVGFHK 564
VR + EALRRAKFKFPG K + ++ GF K
Sbjct: 138 VRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTK 175
Score = 53.6 bits (123), Expect = 1e-07
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = +2
Query: 518 PERQKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEH 649
P RQKI S+KWGFTK+ R+E+ KL+ EGR+ +DG Q H
Sbjct: 160 PGRQKIIHSRKWGFTKFTREEYVKLKAEGRIMSDGVNAQLLGSH 203
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/35 (57%), Positives = 22/35 (62%)
Frame = +3
Query: 39 MGRRPARCYRYCKNKPYPEIEVLSGCT*SQDPYLR 143
MGRRPARCYR KNKPYP+ G DP +R
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGV---PDPKIR 32
>03_02_0897 -
12239375-12239458,12240035-12240116,12240213-12240714,
12241150-12241303,12241458-12241629,12242237-12242443,
12242926-12243323
Length = 532
Score = 234 bits (573), Expect = 4e-62
Identities = 109/156 (69%), Positives = 126/156 (80%)
Frame = +1
Query: 91 PKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLV 270
PKSR+CRGVPDPKIRIFD+G+K+ + DDFPLCVHLVS E E +SSEALEA RI CNKY+
Sbjct: 325 PKSRYCRGVPDPKIRIFDVGQKKRSADDFPLCVHLVSWEKENVSSEALEAARIACNKYMA 384
Query: 271 KNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMS 450
K+ GKD FH+R+ HP+HV+RINKMLSCAGADRLQTGMRGAFGKP GT ARVRIGQ ++S
Sbjct: 385 KHAGKDAFHLRVCAHPYHVLRINKMLSCAGADRLQTGMRGAFGKPTGTCARVRIGQVLLS 444
Query: 451 VRSSDRWKAQVIEALRRAKFKFPGTSKDLRIKEVGF 558
VR D A EALRRAKFKFPG + + + GF
Sbjct: 445 VRCRDANAAHAQEALRRAKFKFPGRQRVIFSAKWGF 480
Score = 50.8 bits (116), Expect = 9e-07
Identities = 20/44 (45%), Positives = 29/44 (65%)
Frame = +2
Query: 518 PERQKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEH 649
P RQ++ S KWGFT+++RDE+ KL+ EGR+ DG + H
Sbjct: 467 PGRQRVIFSAKWGFTRFKRDEYLKLKSEGRIVPDGVNAKLLTRH 510
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +3
Query: 51 PARCYRYCKNKPYPEIEVLSGCT*SQDPYLR 143
P RCYR KNKPYP+ G DP +R
Sbjct: 312 PVRCYRQIKNKPYPKSRYCRGV---PDPKIR 339
>05_01_0490 +
4083768-4083775,4083845-4084336,4084441-4084522,
4086671-4087357,4087555-4087813,4088435-4088558,
4089474-4089564
Length = 580
Score = 230 bits (563), Expect = 6e-61
Identities = 107/158 (67%), Positives = 125/158 (79%)
Frame = +1
Query: 91 PKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLV 270
PKSR+CRGVPDPKIRI+D+G K+ VD+F CVHLVS E E ++SEALEA RI CNKY+
Sbjct: 14 PKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAARIACNKYMT 73
Query: 271 KNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMS 450
K+ GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQ ++S
Sbjct: 74 KSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLS 133
Query: 451 VRSSDRWKAQVIEALRRAKFKFPGTSKDLRIKEVGFHK 564
VR EALRRAKFKFPG K + ++ GF K
Sbjct: 134 VRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTK 171
Score = 52.4 bits (120), Expect = 3e-07
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +2
Query: 518 PERQKIYVSKKWGFTKYERDEFEKLREEGRLANDG 622
P RQKI S+KWGFTK+ RDE+ +L+ EGR+ DG
Sbjct: 156 PGRQKIIESRKWGFTKFSRDEYVRLKSEGRIMPDG 190
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 60 CYRYCKNKPYPEIEVLSGCT*SQDPYLR 143
CYR KNKPYP+ G DP +R
Sbjct: 4 CYRQIKNKPYPKSRYCRGV---PDPKIR 28
>10_08_0141 +
15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 31.1 bits (67), Expect = 0.80
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 163 TVDDFPLC-VHLVSDEYEQLSSEALEAGRICCNKYLVKNCG 282
T D P C +HL SD Y S E ++AG+ C L K G
Sbjct: 587 TTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELG 627
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -2
Query: 443 MGCPMRTRATVP*GLPNAPRIPVWSLSAPAH 351
+ CP+ + + VP LP++P P++S ++P +
Sbjct: 1625 LSCPLTSPSYVPTSLPHSPTSPIYSATSPIY 1655
>04_04_1571 + 34504087-34504421,34505002-34505731,34506091-34512077,
34512493-34513964,34514114-34514377,34514761-34514978,
34515759-34516030,34516190-34516559,34516578-34516797,
34516819-34518931,34518941-34519193,34519269-34519401,
34520597-34521114,34521207-34522115,34522195-34522368,
34522833-34522882,34523963-34524035,34524413-34524477,
34524736-34525522,34525622-34525878,34525989-34526109,
34526315-34526956
Length = 5320
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -3
Query: 208 IRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRTSISGYG 83
+R+ P + +ESR S+Y +R Y W + S++GYG
Sbjct: 3200 LRKDPLSSAIESRSAH-SAYGDRVYSFWPRSKQHPASLTGYG 3240
>09_06_0320 - 22297579-22297760,22298433-22299358,22299422-22299747,
22300591-22300660,22301632-22301726,22301917-22302048,
22302154-22302222,22302953-22303051,22303169-22303253,
22303353-22303453,22303660-22303728,22303861-22303901,
22304085-22304303,22304444-22304470,22304562-22304660,
22304898-22305106,22305382-22305485,22305753-22305894,
22305991-22306289,22306508-22306903
Length = 1229
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 397 GKPQGTVARVRIGQPIMSVRSSD 465
G PQ T+ R+ +G P +S++S+D
Sbjct: 1089 GTPQQTLERLHVGHPTLSLQSND 1111
>08_02_1331 +
26195949-26196132,26196606-26196710,26197270-26198127,
26198669-26199458,26200240-26200329,26200636-26200712,
26200797-26201383
Length = 896
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 486 RGSAPCQVQVPRNVKRSTYQRSGVSQS 566
+GS PC+ +VP+ +K++ Y R G+ S
Sbjct: 727 KGSFPCKAKVPKELKKACY-RQGIWSS 752
>03_02_0491 +
8854438-8854657,8854897-8854942,8855268-8855307,
8856025-8856090,8856237-8856318,8857036-8857595,
8857681-8857771,8858300-8858316
Length = 373
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/70 (24%), Positives = 31/70 (44%)
Frame = -2
Query: 236 SKASELSCSYSSDTKCTHSGKSSTVALFLPKSKIRILGSGTPRQNLDFGIRFIFAVPVAS 57
++A EL + S S + +L LP +++ LG T +D + P+A
Sbjct: 86 TRADELIVNVGSCNHFQISQEGPVSSLLLPLTEMEELGEHTATVAIDLQLISAVEAPLAK 145
Query: 56 CWPAPHGDLY 27
W +GD++
Sbjct: 146 GWGYGYGDIH 155
>12_02_0957 +
24807261-24807311,24807436-24807773,24808727-24808927,
24809024-24809069,24809284-24809600,24809949-24810072,
24810465-24810537,24810968-24811173,24811384-24811651,
24811780-24811877,24812116-24812379
Length = 661
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 269 TRYLLQQIRPASKASELSCSYSSDTKCTHSGKSS 168
+R+ ++ P+ ELSC ++T C H G S
Sbjct: 85 SRFKVRIFNPSGCEKELSCVMMNNTPCGHEGSMS 118
>09_06_0319 - 22293869-22293906,22294539-22295808
Length = 435
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 397 GKPQGTVARVRIGQPIMSVRSSD 465
G PQ T+ R+ +G P +S+ S D
Sbjct: 343 GTPQPTLERLHVGHPTLSLHSDD 365
>06_02_0084 - 11547820-11548773
Length = 317
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +1
Query: 346 LSCAGADRLQTGMRGAFGK--PQGTVARVRIGQPIMSVRSSDRWK 474
L G DR Q GMRGA P RVR +P R +W+
Sbjct: 133 LGAGGGDRGQLGMRGAADGWWPDWRERRVRWRRPAWRERRGRQWR 177
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,013,683
Number of Sequences: 37544
Number of extensions: 496917
Number of successful extensions: 1439
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1439
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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