Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_N05
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48334-1|CAA88308.1|  214|Caenorhabditis elegans Hypothetical pr...   235   3e-62
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ...    33   0.13 
Z66511-7|CAD57693.1|  567|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z46791-1|CAA86761.1|  476|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AF099919-10|AAC68792.1|  205|Caenorhabditis elegans Max-like pro...    28   5.0  
AF099913-8|ABB51194.1|  301|Caenorhabditis elegans Hypothetical ...    28   6.6  

>Z48334-1|CAA88308.1|  214|Caenorhabditis elegans Hypothetical
           protein F10B5.1 protein.
          Length = 214

 Score =  235 bits (574), Expect = 3e-62
 Identities = 111/158 (70%), Positives = 124/158 (78%)
 Frame = +1

Query: 91  PKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLV 270
           PKSRFCRGVPD KIRIFDLG KRA VD FP CVH++S+E E LSSEALEA RIC NKY+V
Sbjct: 18  PKSRFCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHLSSEALEAARICANKYMV 77

Query: 271 KNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMS 450
           KNCGKD FH+R+R HPFHV RINKMLSCAGADRLQTGMRGA+GKPQG VARV IG  + S
Sbjct: 78  KNCGKDGFHLRVRKHPFHVTRINKMLSCAGADRLQTGMRGAYGKPQGLVARVDIGDILFS 137

Query: 451 VRSSDRWKAQVIEALRRAKFKFPGTSKDLRIKEVGFHK 564
           +R  +      IEA RRAKFKFPG    +  ++ GF K
Sbjct: 138 MRIKEGNVKHAIEAFRRAKFKFPGRQIIVSSRKWGFTK 175



 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 24/44 (54%), Positives = 34/44 (77%)
 Frame = +2

Query: 518 PERQKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEH 649
           P RQ I  S+KWGFTK++R+++E++R EGRL +DG  VQ + EH
Sbjct: 160 PGRQIIVSSRKWGFTKWDREDYERMRAEGRLRSDGVGVQLQREH 203



 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 18/25 (72%), Positives = 19/25 (76%)
 Frame = +3

Query: 39  MGRRPARCYRYCKNKPYPEIEVLSG 113
           MGRRPARCYRY KNKPYP+     G
Sbjct: 1   MGRRPARCYRYIKNKPYPKSRFCRG 25


>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
           protein F53H1.4a protein.
          Length = 1370

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = +2

Query: 29  KDHHGAPASKMLPVLQK*TVSRNRGSVGVYLIPRSVSSIWVRRERPLTTFHCACTWCPTN 208
           K   G+P+SK  P+         R +VGV    + +   W RR+  L  ++ AC+WC  N
Sbjct: 306 KKDTGSPSSKNAPLFSPSKWGEKRIAVGV----KKMEDAWKRRD--LELYNEACSWCEKN 359

Query: 209 MN 214
           ++
Sbjct: 360 LS 361


>Z66511-7|CAD57693.1|  567|Caenorhabditis elegans Hypothetical
           protein F07A11.6d protein.
          Length = 567

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = -1

Query: 474 LPPVTRAHGHDGLSNANTCYSTLRLAKRTTHPSLEPISSSA 352
           +P VT A   + LSN  T  ST  LA   T  +L P+S  A
Sbjct: 46  VPVVTTASTPNPLSNLETLLSTASLANLATGGALNPLSMLA 86


>Z46791-1|CAA86761.1|  476|Caenorhabditis elegans Hypothetical
           protein C09G5.2 protein.
          Length = 476

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 404 GLPNAPRIPVWSLSAPA 354
           G PN+P +P+W LS P+
Sbjct: 232 GFPNSPLLPIWLLSYPS 248


>AF099919-10|AAC68792.1|  205|Caenorhabditis elegans Max-like
           protein 2 protein.
          Length = 205

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +1

Query: 100 RFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGR 246
           R C  +   K  I D  K+ A ++     + +++ EYEQ++S   +AG+
Sbjct: 93  RACDFMSQLKTDISDADKQLAQLNAQAAALEMIASEYEQMASSVPDAGQ 141


>AF099913-8|ABB51194.1|  301|Caenorhabditis elegans Hypothetical
           protein C29F9.4 protein.
          Length = 301

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 557 FTKYERDEFEKLREEGRLANDGCIVQYR 640
           F K +RDEFE++R +  LA +  I  Y+
Sbjct: 136 FFKSQRDEFERIRYDPELAEEHFIEAYK 163


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,940,391
Number of Sequences: 27780
Number of extensions: 392326
Number of successful extensions: 1046
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)