Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_M24
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094841-1|AAM11194.1|  204|Drosophila melanogaster RE01373p pro...   275   4e-74
AF030251-1|AAB84223.1|  204|Drosophila melanogaster ribosomal L1...   275   4e-74
AY060386-1|AAL25425.1|  342|Drosophila melanogaster LD29048p pro...    30   2.4  
AE014296-1150|AAS65069.1|  342|Drosophila melanogaster CG32393-P...    30   2.4  
AE014296-1149|AAF50647.2|  342|Drosophila melanogaster CG32393-P...    30   2.4  
AY119636-1|AAM50290.1|  620|Drosophila melanogaster RE43020p pro...    28   9.6  

>AY094841-1|AAM11194.1|  204|Drosophila melanogaster RE01373p
           protein.
          Length = 204

 Score =  275 bits (674), Expect = 4e-74
 Identities = 129/191 (67%), Positives = 144/191 (75%)
 Frame = +3

Query: 51  MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 230
           MGAYRY+QELYRKK SDVMR+LLR+RVWQYRQLT++HR+PRPTRPDKARRLGYRAKQ   
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60

Query: 231 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 410
                              TYGKPKSHGVNQLKP R LQSIAEE            +SYW
Sbjct: 61  IYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYW 120

Query: 411 VAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHXY 590
           +AQD+SYKYFEVIL+D  H AIRRDPKINWI   VHKHRE+RGLTSAG+SSRG+GKG+ Y
Sbjct: 121 IAQDASYKYFEVILIDTHHSAIRRDPKINWICKHVHKHRELRGLTSAGKSSRGIGKGYRY 180

Query: 591 SQTKGXSRRGS 623
           SQT G SRR +
Sbjct: 181 SQTIGGSRRAA 191


>AF030251-1|AAB84223.1|  204|Drosophila melanogaster ribosomal L15
           (YL10) protein homologueprotein.
          Length = 204

 Score =  275 bits (674), Expect = 4e-74
 Identities = 129/191 (67%), Positives = 144/191 (75%)
 Frame = +3

Query: 51  MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 230
           MGAYRY+QELYRKK SDVMR+LLR+RVWQYRQLT++HR+PRPTRPDKARRLGYRAKQ   
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60

Query: 231 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 410
                              TYGKPKSHGVNQLKP R LQSIAEE            +SYW
Sbjct: 61  IYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYW 120

Query: 411 VAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHXY 590
           +AQD+SYKYFEVIL+D  H AIRRDPKINWI   VHKHRE+RGLTSAG+SSRG+GKG+ Y
Sbjct: 121 IAQDASYKYFEVILIDTHHSAIRRDPKINWICKHVHKHRELRGLTSAGKSSRGIGKGYRY 180

Query: 591 SQTKGXSRRGS 623
           SQT G SRR +
Sbjct: 181 SQTIGGSRRAA 191


>AY060386-1|AAL25425.1|  342|Drosophila melanogaster LD29048p
           protein.
          Length = 342

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = +3

Query: 498 WIVNAVHKHREMRGLTSAGRSSRGLGKGHXYSQTKGXSRRGSLGSNATLF 647
           W       +RE +    +  SS G G G   + T G S    +GSN T++
Sbjct: 164 WYFYGTRLYREDKATGGSASSSSGSGSGGAGASTGGASNSKGIGSNGTVW 213


>AE014296-1150|AAS65069.1|  342|Drosophila melanogaster CG32393-PB,
           isoform B protein.
          Length = 342

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = +3

Query: 498 WIVNAVHKHREMRGLTSAGRSSRGLGKGHXYSQTKGXSRRGSLGSNATLF 647
           W       +RE +    +  SS G G G   + T G S    +GSN T++
Sbjct: 164 WYFYGTRLYREDKATGGSASSSSGSGSGGAGASTGGASNSKGIGSNGTVW 213


>AE014296-1149|AAF50647.2|  342|Drosophila melanogaster CG32393-PA,
           isoform A protein.
          Length = 342

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = +3

Query: 498 WIVNAVHKHREMRGLTSAGRSSRGLGKGHXYSQTKGXSRRGSLGSNATLF 647
           W       +RE +    +  SS G G G   + T G S    +GSN T++
Sbjct: 164 WYFYGTRLYREDKATGGSASSSSGSGSGGAGASTGGASNSKGIGSNGTVW 213


>AY119636-1|AAM50290.1|  620|Drosophila melanogaster RE43020p
           protein.
          Length = 620

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 20/63 (31%), Positives = 28/63 (44%)
 Frame = +2

Query: 395 VELLLGCTRFFIQVFRGYPRGPVTQGHSSRS*DQLDRECCT*ASRDAWSDFGWSQLPRSR 574
           V LL+   RF+I V RG P   V     +      + +  T ASR A       ++P+SR
Sbjct: 499 VGLLINIARFWIDVKRGSPPSKVVYVEHAHHQHHYEDQGTTGASRVAIGSAHCKRIPQSR 558

Query: 575 QGT 583
             T
Sbjct: 559 TQT 561


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,751,679
Number of Sequences: 53049
Number of extensions: 664005
Number of successful extensions: 2022
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2020
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)