Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_M23
         (400 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1574 + 38337669-38338196                                         32   0.19 
04_04_1447 + 33675146-33675922                                         27   7.2  
04_04_0071 - 22513684-22513697,22514052-22514328,22514417-225146...    27   7.2  
08_02_0866 + 22006822-22006899,22006997-22007080,22007621-220077...    26   9.5  
08_02_0752 - 20795447-20795502,20795673-20795893,20795998-207960...    26   9.5  
07_01_1152 - 10837540-10839549                                         26   9.5  
03_05_0893 + 28566436-28566501,28566624-28566903,28567002-285671...    26   9.5  

>01_06_1574 + 38337669-38338196
          Length = 175

 Score = 31.9 bits (69), Expect = 0.19
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = -2

Query: 333 AESVCHVSLYHLRNWRINSPGARSSRGANYGLISRCLCHFC 211
           A S+C    YH+R  R     +   +G  Y     CLC  C
Sbjct: 37  AHSLCPYKFYHIRCLRYEQIASSEQQGNEYWYCPSCLCRVC 77


>04_04_1447 + 33675146-33675922
          Length = 258

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 243 GLISRCLCHFCGSRRFCCFGSLCRRLSGI 157
           G ISR  C+ CG+  +   GS CRR   +
Sbjct: 82  GDISRAACYDCGTSVWRDAGSACRRAKDV 110


>04_04_0071 -
           22513684-22513697,22514052-22514328,22514417-22514659,
           22515119-22515157
          Length = 190

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 201 RFCCFGSLCRRLSG 160
           RFCCFG+ C   SG
Sbjct: 3   RFCCFGAGCSEFSG 16


>08_02_0866 +
           22006822-22006899,22006997-22007080,22007621-22007719,
           22007864-22007908,22008170-22008265,22009150-22009227,
           22009864-22009949,22010038-22010104,22010192-22010254,
           22010332-22010433,22010559-22010663,22010748-22010840,
           22011380-22011468,22012049-22012268,22012816-22012899,
           22013221-22013337,22013399-22013473,22013589-22013675,
           22013766-22013828,22014833-22014949,22015231-22015323,
           22015794-22015919,22015992-22016092,22016917-22016996,
           22017023-22017093,22017200-22017256,22017430-22017573
          Length = 839

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -2

Query: 270 ARSSRGANYGLISRCLCHFCGSRRFCCFGSLCRRLSGICYLEPVP 136
           +RSSR     ++S C   FC  R +   G + +R+S     E +P
Sbjct: 276 SRSSRKEYTQILSECHSLFCEQRLYLIRGMVQQRISEFARKEALP 320


>08_02_0752 -
           20795447-20795502,20795673-20795893,20795998-20796083,
           20796315-20796405,20796499-20796584,20796705-20796807,
           20796888-20796985,20797771-20797950
          Length = 306

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 92  TDSGGLCFRGCQCSQGTGSK*QIPLNRRHKLPKQQKRR 205
           ++S G  + G  CS G  S  ++PL  RH+ P +  RR
Sbjct: 12  SESSGHHWAGYSCSAGEASSPRLPL--RHRPPPRDFRR 47


>07_01_1152 - 10837540-10839549
          Length = 669

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 152 TWSLYLGNIGSRESTNRQNQ*YTLPHD 72
           TW+ Y+G + SR   NR N  + +  D
Sbjct: 119 TWAQYIGLLNSRNDGNRSNHMFAVELD 145


>03_05_0893 +
           28566436-28566501,28566624-28566903,28567002-28567188,
           28567353-28567423,28567523-28567600,28567687-28567774,
           28567875-28567930,28568054-28568121
          Length = 297

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 258 RGANYGLISRCLCHFCGSRRFC 193
           RGA Y  +    CHFC  ++ C
Sbjct: 162 RGAVYDPVLGICCHFCRQKKLC 183


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,535,724
Number of Sequences: 37544
Number of extensions: 174940
Number of successful extensions: 370
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 370
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 682720236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)