Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_M23
(400 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ227306-1|ABA86591.1| 504|Homo sapiens zinc finger and BTB dom... 28 9.9
BC025353-1|AAH25353.1| 599|Homo sapiens Similar to DKFZP434N178... 28 9.9
BC009415-1|AAH09415.1| 203|Homo sapiens KIF26A protein protein. 28 9.9
AL731551-1|CAI40246.1| 3623|Homo sapiens cubilin (intrinsic fact... 28 9.9
AL596445-1|CAH72450.1| 3623|Homo sapiens cubilin (intrinsic fact... 28 9.9
AL365215-1|CAH73630.1| 3623|Homo sapiens cubilin (intrinsic fact... 28 9.9
AL354944-1|CAH69994.1| 504|Homo sapiens zinc finger and BTB dom... 28 9.9
AF243129-1|AAK61830.1| 3494|Homo sapiens intrinsic factor-vitami... 28 9.9
AF034611-1|AAC82612.1| 3623|Homo sapiens intrinsic factor-B12 re... 28 9.9
AB082524-1|BAC02702.1| 532|Homo sapiens KIAA1993 protein protein. 28 9.9
AB033062-1|BAA86550.2| 1840|Homo sapiens KIAA1236 protein protein. 28 9.9
>DQ227306-1|ABA86591.1| 504|Homo sapiens zinc finger and BTB domain
containing 34 protein.
Length = 504
Score = 28.3 bits (60), Expect = 9.9
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -2
Query: 282 NSPGARSSRGANYGLISRCLCHFCGSRRFCCFGSLCRRL 166
+SP RS+RG Y R +C +CG + F GSL R +
Sbjct: 358 SSPRERSARGHWYPYNERLICIYCG-KSFNQKGSLDRHM 395
>BC025353-1|AAH25353.1| 599|Homo sapiens Similar to DKFZP434N178
protein protein.
Length = 599
Score = 28.3 bits (60), Expect = 9.9
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 188 KQQKRREPQK*HRHL-EISP*FAPRLLLAPGLFIRQF 295
+QQ+ RE Q H+HL E RL+L PG ++ QF
Sbjct: 504 RQQRLREVQAKHKHLCEELAETQGRLMLEPGRWLEQF 540
>BC009415-1|AAH09415.1| 203|Homo sapiens KIF26A protein protein.
Length = 203
Score = 28.3 bits (60), Expect = 9.9
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 188 KQQKRREPQK*HRHL-EISP*FAPRLLLAPGLFIRQF 295
+QQ+ RE Q H+HL E RL+L PG ++ QF
Sbjct: 108 RQQRLREVQAKHKHLCEELAETQGRLMLEPGRWLEQF 144
>AL731551-1|CAI40246.1| 3623|Homo sapiens cubilin (intrinsic
factor-cobalamin receptor) protein.
Length = 3623
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 268 CAWTVYSPVSKMIQTNMTNRFCICSADTTC 357
C+WT + SK ++ + N F I S D C
Sbjct: 2831 CSWTAITHKSKHLEISFDNNFLIPSGDGQC 2860
>AL596445-1|CAH72450.1| 3623|Homo sapiens cubilin (intrinsic
factor-cobalamin receptor) protein.
Length = 3623
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 268 CAWTVYSPVSKMIQTNMTNRFCICSADTTC 357
C+WT + SK ++ + N F I S D C
Sbjct: 2831 CSWTAITHKSKHLEISFDNNFLIPSGDGQC 2860
>AL365215-1|CAH73630.1| 3623|Homo sapiens cubilin (intrinsic
factor-cobalamin receptor) protein.
Length = 3623
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 268 CAWTVYSPVSKMIQTNMTNRFCICSADTTC 357
C+WT + SK ++ + N F I S D C
Sbjct: 2831 CSWTAITHKSKHLEISFDNNFLIPSGDGQC 2860
>AL354944-1|CAH69994.1| 504|Homo sapiens zinc finger and BTB domain
containing 34 protein.
Length = 504
Score = 28.3 bits (60), Expect = 9.9
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -2
Query: 282 NSPGARSSRGANYGLISRCLCHFCGSRRFCCFGSLCRRL 166
+SP RS+RG Y R +C +CG + F GSL R +
Sbjct: 358 SSPRERSARGHWYPYNERLICIYCG-KSFNQKGSLDRHM 395
>AF243129-1|AAK61830.1| 3494|Homo sapiens intrinsic factor-vitamin B12
receptor protein.
Length = 3494
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 268 CAWTVYSPVSKMIQTNMTNRFCICSADTTC 357
C+WT + SK ++ + N F I S D C
Sbjct: 2702 CSWTAITHKSKHLEISFDNNFLIPSGDGQC 2731
>AF034611-1|AAC82612.1| 3623|Homo sapiens intrinsic factor-B12
receptor precursor protein.
Length = 3623
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 268 CAWTVYSPVSKMIQTNMTNRFCICSADTTC 357
C+WT + SK ++ + N F I S D C
Sbjct: 2831 CSWTAITHKSKHLEISFDNNFLIPSGDGQC 2860
>AB082524-1|BAC02702.1| 532|Homo sapiens KIAA1993 protein protein.
Length = 532
Score = 28.3 bits (60), Expect = 9.9
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -2
Query: 282 NSPGARSSRGANYGLISRCLCHFCGSRRFCCFGSLCRRL 166
+SP RS+RG Y R +C +CG + F GSL R +
Sbjct: 386 SSPRERSARGHWYPYNERLICIYCG-KSFNQKGSLDRHM 423
>AB033062-1|BAA86550.2| 1840|Homo sapiens KIAA1236 protein protein.
Length = 1840
Score = 28.3 bits (60), Expect = 9.9
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 188 KQQKRREPQK*HRHL-EISP*FAPRLLLAPGLFIRQF 295
+QQ+ RE Q H+HL E RL+L PG ++ QF
Sbjct: 1745 RQQRLREVQAKHKHLCEELAETQGRLMLEPGRWLEQF 1781
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,985,573
Number of Sequences: 237096
Number of extensions: 967863
Number of successful extensions: 2012
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2012
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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