Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_M23
         (400 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68131-1|CAA92217.1|  467|Caenorhabditis elegans Hypothetical pr...    30   0.70 
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr...    27   6.5  
U00065-1|AAK68287.1|  400|Caenorhabditis elegans Hypothetical pr...    27   6.5  

>Z68131-1|CAA92217.1|  467|Caenorhabditis elegans Hypothetical
           protein B0395.2 protein.
          Length = 467

 Score = 29.9 bits (64), Expect = 0.70
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = +1

Query: 229 SGNKPIICAPTTPCAWTVYSPVSKMIQTNMTNRFCICSADTTCAITEXDTEVHAYI 396
           + N P + A  T  A   Y P+  + ++++    C CS   TC  T    +VH++I
Sbjct: 134 ASNLPFVTAYVTYLAAFFYFPLKFLYESDLK---CACSFIITCETTRIAMKVHSFI 186


>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
            ZK783.1 protein.
          Length = 2585

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 213  CGSRRFCCFGSLCRRLSGICYLEPVPWEHWQPRK 112
            C S   C   +LC R +G+C  EP  +E   P+K
Sbjct: 1414 CTSSDECGLDALCERRTGVCRCEP-GFEGAPPKK 1446


>U00065-1|AAK68287.1|  400|Caenorhabditis elegans Hypothetical
           protein D1044.7 protein.
          Length = 400

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +1

Query: 235 NKPIICAPTTPCA-WTVYSPVSKM--IQTNMTNRFCICSADTTCAITEXDTEVHA 390
           N+P+ C P  PC+ ++V +    +    +N  N  C  S +T C  T    +V A
Sbjct: 33  NQPLTCTPQDPCSCFSVSARYGAICHYSSNYNNYLCCHSQNTQCG-TNSSPQVSA 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,977,050
Number of Sequences: 27780
Number of extensions: 145779
Number of successful extensions: 363
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 363
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)