Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_M15
(395 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0431 + 29308635-29308782,29308882-29309048,29309747-29309869 62 2e-10
02_05_1254 - 35275050-35275178,35275701-35275867,35275969-35276116 59 1e-09
05_06_0252 - 26695467-26695595,26697233-26697399,26697503-26697650 58 2e-09
11_05_0065 + 18766566-18766576,18767023-18767083,18767170-187672... 30 0.78
04_03_0582 + 17528335-17529790,17529913-17531651,17531814-175320... 29 1.4
09_02_0336 - 7397745-7398308,7398813-7400723 29 1.8
03_05_0394 + 23758392-23758625,23759097-23759273,23759349-237594... 29 1.8
11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,223... 27 4.1
12_02_0105 + 13647356-13648534 27 7.2
05_05_0075 + 22209322-22210041,22210323-22210391,22210775-222111... 27 7.2
02_02_0080 + 6598427-6598663,6599246-6599391,6599567-6599669,660... 27 7.2
07_01_0695 + 5251802-5253016 26 9.6
04_04_0330 + 24456200-24456261,24456385-24456520,24457100-244571... 26 9.6
01_06_0878 - 32669790-32669846,32670206-32670299,32670384-326704... 26 9.6
01_02_0022 + 10290033-10290407,10290497-10290848,10290923-102910... 26 9.6
>01_06_0431 + 29308635-29308782,29308882-29309048,29309747-29309869
Length = 145
Score = 62.1 bits (144), Expect = 2e-10
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = +3
Query: 78 SLNWMIIRNNNAFLVKK---RNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 248
SL W +++ NN+FLVK+ N K FSKEPNN+ N+HS++++GL +KK V V+ K
Sbjct: 7 SLVWELVKKNNSFLVKQFGNGNAKVQFSKEPNNLYNVHSYKHSGLANKKTV-TVQPASGK 65
Query: 249 GFTVVYKKAKATRKPAKNLSAVHSRLV 329
VV K T K K S H ++
Sbjct: 66 ETAVVLSTTK-TEKQNKPASLYHKSVM 91
>02_05_1254 - 35275050-35275178,35275701-35275867,35275969-35276116
Length = 147
Score = 59.3 bits (137), Expect = 1e-09
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Frame = +3
Query: 81 LNWMIIRNNNAFLVKK---RNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 251
L W I++ NN FLVK+ N K F+KEPNN+ N+HS++++GL +KK V + + +
Sbjct: 8 LFWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSGLANKKTVTIQPSGGKDA 67
Query: 252 FTVV-YKKAKATRKPAK 299
V+ K K PAK
Sbjct: 68 AVVLSTTKTKKQNAPAK 84
>05_06_0252 - 26695467-26695595,26697233-26697399,26697503-26697650
Length = 147
Score = 58.4 bits (135), Expect = 2e-09
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Frame = +3
Query: 81 LNWMIIRNNNAFLVKK---RNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 251
L W I++ NN FLVK+ N K F+KEPNN+ N+HS++++GL +KK V + + +
Sbjct: 8 LIWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSGLANKKTVTIQPSGVKDA 67
Query: 252 FTVV-YKKAKATRKPAK 299
V+ K K PAK
Sbjct: 68 AVVLSTTKTKKQNAPAK 84
>11_05_0065 + 18766566-18766576,18767023-18767083,18767170-18767268,
18767346-18767467,18767577-18767673,18767778-18767824,
18768020-18768203,18768349-18768400,18768795-18768985,
18769072-18770020,18770866-18771022,18771134-18771206,
18771292-18771465,18771880-18771993,18772110-18772236,
18772331-18772443,18772614-18772729,18772847-18773000
Length = 946
Score = 29.9 bits (64), Expect = 0.78
Identities = 14/56 (25%), Positives = 30/56 (53%)
Frame = +3
Query: 159 PNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATRKPAKNLSAVHSRL 326
P V++ H+ + L K ++ R + + + +A + P+K+L+A++SRL
Sbjct: 839 PKKVSSSHNVYVSPLRQTKMDALLSPSSRSFYACIGESTQAFQSPSKDLAAINSRL 894
>04_03_0582 +
17528335-17529790,17529913-17531651,17531814-17532035,
17532062-17533525
Length = 1626
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 60 TVKMSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFR 191
T++ SS+L WM+I + N L + + FSK P T + +FR
Sbjct: 582 TIRQSSALPWMVIGDFNETLWQFEH----FSKNPRCETQMQNFR 621
>09_02_0336 - 7397745-7398308,7398813-7400723
Length = 824
Score = 28.7 bits (61), Expect = 1.8
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +2
Query: 65 KNVVVTELDDHPQQQCIPCEEAQYQKAVQQGAEQ 166
KN ++ L+ +QCI C + ++ K++++GA++
Sbjct: 184 KNEILPPLEFSDLEQCIECIKGKFVKSIKKGAKR 217
>03_05_0394 +
23758392-23758625,23759097-23759273,23759349-23759453,
23759640-23759681,23759763-23759960,23760037-23760165,
23760248-23760377,23761119-23761179,23761241-23761322,
23761402-23761653
Length = 469
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 179 EVSHIVRLLAERLFDIALLHKECIVVADDHPVQ*RRH 69
+VSHI+ + E+ D+AL + EC + + H Q H
Sbjct: 361 KVSHIIVVACEKCLDLALKYVECCLKHNQHFEQNEPH 397
>11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,
2233053-2233513,2233593-2233717,2233801-2234098,
2235004-2236234,2236562-2237233,2237329-2238539
Length = 1884
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +3
Query: 102 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 251
N A + K KKP ++P +Y GL+ KK+ N + G
Sbjct: 1474 NAGAQVQPKTKSKKPKPEKPRKSKKTEEIKYFGLVWKKSTNDKNNNENSG 1523
>12_02_0105 + 13647356-13648534
Length = 392
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -2
Query: 181 WRLVTLFGSLLNGFLILRFFTRNALLLRMIIQFSDDDI 68
W L + LL G L+ R + +L+R+I DDI
Sbjct: 250 WALGCIMAQLLGGQLLFRGMSHEDMLIRIIQVLGVDDI 287
>05_05_0075 +
22209322-22210041,22210323-22210391,22210775-22211145,
22212291-22212351,22212496-22213086
Length = 603
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +3
Query: 108 NAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLI--HKKAVGVVENPDRKG 251
N + R+I+ S+ P++++ SF YNGL H A+ PD G
Sbjct: 478 NHSISASRHIEDGLSQMPHDISGQVSFAYNGLAAHHSIAMAHHHQPDLIG 527
>02_02_0080 +
6598427-6598663,6599246-6599391,6599567-6599669,
6600407-6600593,6600699-6600792,6601290-6601443,
6601751-6601855,6601937-6602053,6602248-6602361,
6602891-6603073,6603207-6603486,6603565-6603686,
6603763-6603860,6603941-6604118,6604439-6604553,
6604656-6604723,6604825-6604902,6604986-6605060,
6605156-6605338
Length = 878
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +2
Query: 47 EIGLNRKNVVVTELDDHPQQQCIPCEEAQYQKAV 148
E+ +KN+ VT+ + ++C PC + KA+
Sbjct: 131 ELNGEKKNMAVTQFEPADARRCFPCWDEPSFKAI 164
>07_01_0695 + 5251802-5253016
Length = 404
Score = 26.2 bits (55), Expect = 9.6
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +3
Query: 219 VGVVENPDRKGFTVVYKKAKATRKPAKNLSAVHSRLVPGGHCTSEEVVKG 368
V +VE P TV+ AT PAK++SA + L+ G E G
Sbjct: 124 VCLVEGPSPLDVTVLDPVTGATYIPAKSISADNKDLLSSGRLIMESCAFG 173
>04_04_0330 +
24456200-24456261,24456385-24456520,24457100-24457165,
24457260-24457310,24457399-24457455,24457742-24457827,
24458207-24458216,24458385-24458450,24458744-24458784,
24460050-24460182,24460857-24461045,24461145-24461219,
24462228-24462358,24463155-24463229,24463385-24463562
Length = 451
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = -2
Query: 256 VNPFLSGFSTTPTAFL*IKPLYLKEWRLVTLFGSLLNGFLILRFFTR 116
++PF++G S L I+ + W L +GS++ G ++ + T+
Sbjct: 162 IDPFVAGTSGGDPESLSIRHAFPALWNLENKYGSVIAGAILSKLSTK 208
>01_06_0878 -
32669790-32669846,32670206-32670299,32670384-32670499,
32670786-32671096,32672243-32672364,32672754-32672870,
32672982-32673054,32673416-32673542,32673659-32673727,
32673811-32674170,32674493-32674633
Length = 528
Score = 26.2 bits (55), Expect = 9.6
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +2
Query: 92 DHPQQQCIPCEEAQYQKAVQQGAEQCD*PPLLQVQRLDSQESRWCRGEP*QEGI 253
D P+ Q I E A ++ E CD L QV L+++ C E +E I
Sbjct: 135 DSPKAQEILKEPASSEEGCSSSLESCDQVYLAQVSILNTENKERCSLEVLKEDI 188
>01_02_0022 +
10290033-10290407,10290497-10290848,10290923-10291070,
10291145-10291225,10291651-10291822,10292120-10292158,
10292384-10292543,10292676-10292779,10292979-10293278
Length = 576
Score = 26.2 bits (55), Expect = 9.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -2
Query: 256 VNPFLSGFSTTPTAFL*IKPLYLKEWRLVTLFGSLLNG 143
+ PF SG + L +K + K WRL GS++ G
Sbjct: 237 IEPFCSGVYAGDPSKLSMKAAFGKVWRLEDTGGSIIGG 274
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,219,326
Number of Sequences: 37544
Number of extensions: 185079
Number of successful extensions: 468
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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