BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_M12
(480 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070671-1|AAL48142.1| 148|Drosophila melanogaster RH07540p pro... 229 1e-60
AE013599-3413|AAF46862.1| 148|Drosophila melanogaster CG4046-PA... 229 1e-60
AY089671-1|AAL90409.1| 395|Drosophila melanogaster RH44312p pro... 39 0.004
AE014297-663|AAF54157.3| 395|Drosophila melanogaster CG2957-PA ... 39 0.004
BT001588-1|AAN71343.1| 840|Drosophila melanogaster RE26469p pro... 32 0.35
AY823301-1|AAV70987.1| 808|Drosophila melanogaster potassium ch... 32 0.35
AY823300-1|AAV70986.1| 808|Drosophila melanogaster potassium ch... 32 0.35
AE013599-1042|AAF58829.4| 992|Drosophila melanogaster CG33135-P... 32 0.35
AE013599-1041|AAF58830.3| 807|Drosophila melanogaster CG33135-P... 32 0.35
BT030141-1|ABN49280.1| 374|Drosophila melanogaster IP17450p pro... 28 7.6
BT003514-1|AAO39518.1| 689|Drosophila melanogaster RE27406p pro... 28 7.6
AY071550-1|AAL49172.1| 445|Drosophila melanogaster RE59904p pro... 28 7.6
AE014297-3877|AAF56532.2| 689|Drosophila melanogaster CG31090-P... 28 7.6
AE014134-2094|AAF53120.1| 445|Drosophila melanogaster CG14937-P... 28 7.6
>AY070671-1|AAL48142.1| 148|Drosophila melanogaster RH07540p
protein.
Length = 148
Score = 229 bits (561), Expect = 1e-60
Identities = 106/132 (80%), Positives = 122/132 (92%)
Frame = +2
Query: 26 VQEARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLL 205
+Q+ RREP+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ +EP++LQYKLQEP+LLL
Sbjct: 1 MQQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60
Query: 206 GKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILXQYDRS 385
GKEKF+ VDIRV V GGGHVAQ+YAIRQAISKAL+AFYQKYVDEASKKEIKDIL QYDR+
Sbjct: 61 GKEKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRT 120
Query: 386 LLVAXPXPCKPK 421
LLV P C+PK
Sbjct: 121 LLVGDPRRCEPK 132
>AE013599-3413|AAF46862.1| 148|Drosophila melanogaster CG4046-PA
protein.
Length = 148
Score = 229 bits (561), Expect = 1e-60
Identities = 106/132 (80%), Positives = 122/132 (92%)
Frame = +2
Query: 26 VQEARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLL 205
+Q+ RREP+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ +EP++LQYKLQEP+LLL
Sbjct: 1 MQQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60
Query: 206 GKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILXQYDRS 385
GKEKF+ VDIRV V GGGHVAQ+YAIRQAISKAL+AFYQKYVDEASKKEIKDIL QYDR+
Sbjct: 61 GKEKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRT 120
Query: 386 LLVAXPXPCKPK 421
LLV P C+PK
Sbjct: 121 LLVGDPRRCEPK 132
>AY089671-1|AAL90409.1| 395|Drosophila melanogaster RH44312p
protein.
Length = 395
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +2
Query: 77 KKTATA-VAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKG 253
+KTA A V G G + +NG+ + E + +L P+ E VD+ V+G
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEG 333
Query: 254 GGHVAQVYAIRQAISKALIAFYQKYVDEASK 346
GG Q AIR I+ +L +F + + E+ +
Sbjct: 334 GGPSGQAGAIRWGIAMSLRSFVDQEMIESMR 364
>AE014297-663|AAF54157.3| 395|Drosophila melanogaster CG2957-PA
protein.
Length = 395
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +2
Query: 77 KKTATA-VAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKG 253
+KTA A V G G + +NG+ + E + +L P+ E VD+ V+G
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEG 333
Query: 254 GGHVAQVYAIRQAISKALIAFYQKYVDEASK 346
GG Q AIR I+ +L +F + + E+ +
Sbjct: 334 GGPSGQAGAIRWGIAMSLRSFVDQEMIESMR 364
>BT001588-1|AAN71343.1| 840|Drosophila melanogaster RE26469p
protein.
Length = 840
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 200 LLGKEKFSMVDI-RVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILXQY 376
LLG+ K + + ++ K G VYA + +++ ++ ++ D K +I
Sbjct: 507 LLGRVKMLHLRLDQILGKQGSKAKDVYASKISLASRVVKVERQVADIEEKLDILIKAYME 566
Query: 377 DRSLLVAXPXPCKPK 421
DR +A P P KPK
Sbjct: 567 DRDRFLALPLPAKPK 581
>AY823301-1|AAV70987.1| 808|Drosophila melanogaster potassium
channel KCNQ protein.
Length = 808
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 200 LLGKEKFSMVDI-RVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILXQY 376
LLG+ K + + ++ K G VYA + +++ ++ ++ D K +I
Sbjct: 475 LLGRVKMLHLRLDQILGKQGSKAKDVYASKISLASRVVKVERQVADIEEKLDILIKAYME 534
Query: 377 DRSLLVAXPXPCKPK 421
DR +A P P KPK
Sbjct: 535 DRDRFLALPLPAKPK 549
>AY823300-1|AAV70986.1| 808|Drosophila melanogaster potassium
channel KCNQ protein.
Length = 808
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 200 LLGKEKFSMVDI-RVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILXQY 376
LLG+ K + + ++ K G VYA + +++ ++ ++ D K +I
Sbjct: 475 LLGRVKMLHLRLDQILGKQGSKAKDVYASKISLASRVVKVERQVADIEEKLDILIKAYME 534
Query: 377 DRSLLVAXPXPCKPK 421
DR +A P P KPK
Sbjct: 535 DRDRFLALPLPAKPK 549
>AE013599-1042|AAF58829.4| 992|Drosophila melanogaster CG33135-PA,
isoform A protein.
Length = 992
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 200 LLGKEKFSMVDI-RVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILXQY 376
LLG+ K + + ++ K G VYA + +++ ++ ++ D K +I
Sbjct: 659 LLGRVKMLHLRLDQILGKQGSKAKDVYASKISLASRVVKVERQVADIEEKLDILIKAYME 718
Query: 377 DRSLLVAXPXPCKPK 421
DR +A P P KPK
Sbjct: 719 DRDRFLALPLPAKPK 733
>AE013599-1041|AAF58830.3| 807|Drosophila melanogaster CG33135-PB,
isoform B protein.
Length = 807
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 200 LLGKEKFSMVDI-RVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILXQY 376
LLG+ K + + ++ K G VYA + +++ ++ ++ D K +I
Sbjct: 474 LLGRVKMLHLRLDQILGKQGSKAKDVYASKISLASRVVKVERQVADIEEKLDILIKAYME 533
Query: 377 DRSLLVAXPXPCKPK 421
DR +A P P KPK
Sbjct: 534 DRDRFLALPLPAKPK 548
>BT030141-1|ABN49280.1| 374|Drosophila melanogaster IP17450p
protein.
Length = 374
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 191 PILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKE 352
P L G+EK S+ D+ ++ G V + I A+I FY ++++ KK+
Sbjct: 81 PSLEDGEEKLSVKDLSQALQHFGIVDYLVFIAMLAVCAVIGFYFGFIEKKQKKQ 134
>BT003514-1|AAO39518.1| 689|Drosophila melanogaster RE27406p
protein.
Length = 689
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 191 PILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKE 352
P L G+EK S+ D+ ++ G V + I A+I FY ++++ KK+
Sbjct: 81 PSLEDGEEKLSVKDLSQALQHFGIVDYLVFIAMLAVCAVIGFYFGFIEKKQKKQ 134
>AY071550-1|AAL49172.1| 445|Drosophila melanogaster RE59904p
protein.
Length = 445
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 121 SMTTLAIRNCGGGFLTSEYLDGLDGLTSCLLHSSHF 14
++ +L +R C +T +YL LD LT LH HF
Sbjct: 142 NLKSLKLRGCQ---ITGKYLCDLDELTDLRLHDCHF 174
>AE014297-3877|AAF56532.2| 689|Drosophila melanogaster CG31090-PA
protein.
Length = 689
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 191 PILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKE 352
P L G+EK S+ D+ ++ G V + I A+I FY ++++ KK+
Sbjct: 81 PSLEDGEEKLSVKDLSQALQHFGIVDYLVFIAMLAVCAVIGFYFGFIEKKQKKQ 134
>AE014134-2094|AAF53120.1| 445|Drosophila melanogaster CG14937-PA
protein.
Length = 445
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 121 SMTTLAIRNCGGGFLTSEYLDGLDGLTSCLLHSSHF 14
++ +L +R C +T +YL LD LT LH HF
Sbjct: 142 NLKSLKLRGCQ---ITGKYLCDLDELTDLRLHDCHF 174
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,321,167
Number of Sequences: 53049
Number of extensions: 475429
Number of successful extensions: 1426
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1426
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -