Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_M08
(572 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0010 + 30990002-30990273,30990372-30990488,30990581-309906... 144 3e-35
07_01_0071 - 522920-523063,524125-524212,524289-524677 143 8e-35
03_06_0007 - 30975910-30975921,30976660-30976747,30976850-309769... 103 1e-22
11_04_0056 + 12942802-12942920,12943022-12943115 54 6e-08
04_03_0232 - 13049649-13052807 31 0.65
01_06_0134 + 26805329-26805430,26807130-26807230,26807876-268080... 31 0.86
04_01_0084 - 912255-912368,912738-912822,914050-917105,920290-92... 29 2.0
05_03_0238 - 10783451-10783735,10784686-10785762 29 3.5
05_01_0301 - 2356880-2357959 28 6.1
02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622 28 6.1
12_01_0645 - 5468344-5470266 27 8.0
10_01_0326 + 3574129-3574329,3575144-3575692,3575914-3576072,357... 27 8.0
>03_06_0010 +
30990002-30990273,30990372-30990488,30990581-30990668,
30991505-30991648
Length = 206
Score = 144 bits (350), Expect = 3e-35
Identities = 66/131 (50%), Positives = 88/131 (67%)
Frame = -1
Query: 566 RXKLKLMSFLRKRCNVNPARGPFHFRXPXKIXWKTVRGMIPHKTERGKNAXRRLRTYDGC 387
R K+K + FLRKR N P+ GP HFR P KI W+TVRGMIPHKT+RG+ A RL+ Y+G
Sbjct: 54 RQKMKYLRFLRKRMNTKPSHGPIHFRSPAKILWRTVRGMIPHKTKRGEAALARLKAYEGV 113
Query: 386 PPPFDNXXXXXXXXXXXVFCXKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRV 207
PPP+D V +PG YC +G+LS E+GW Y D +R+LE+KRK KA +V
Sbjct: 114 PPPYDRTKRMVIPDALKVLRLQPGHKYCLLGQLSKEVGWNYYDTIRELEEKRKEKA--KV 171
Query: 206 AYEKKLKRITK 174
AY+++ K++ K
Sbjct: 172 AYDRR-KQLAK 181
>07_01_0071 - 522920-523063,524125-524212,524289-524677
Length = 206
Score = 143 bits (347), Expect = 8e-35
Identities = 65/131 (49%), Positives = 87/131 (66%)
Frame = -1
Query: 566 RXKLKLMSFLRKRCNVNPARGPFHFRXPXKIXWKTVRGMIPHKTERGKNAXRRLRTYDGC 387
R K+K + FLRKR N P+ GP HFR P +I W+TVRGMIPHKT RG+ A L+ +DG
Sbjct: 54 RQKMKYLRFLRKRMNTKPSHGPIHFRAPSRIFWRTVRGMIPHKTPRGEAALANLKAFDGV 113
Query: 386 PPPFDNXXXXXXXXXXXVFCXKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRV 207
PPP+D V +PG YC +G+LS E+GW Y D +R+LE+KRK KA +V
Sbjct: 114 PPPYDRTKRMVVPDALKVLRLQPGHKYCLLGQLSKEVGWNYHDTIRELEEKRKEKA--KV 171
Query: 206 AYEKKLKRITK 174
AYE++ K++T+
Sbjct: 172 AYERR-KQLTR 181
>03_06_0007 -
30975910-30975921,30976660-30976747,30976850-30976966,
30977081-30977154
Length = 96
Score = 103 bits (247), Expect = 1e-22
Identities = 44/92 (47%), Positives = 56/92 (60%)
Frame = -1
Query: 524 NVNPARGPFHFRXPXKIXWKTVRGMIPHKTERGKNAXRRLRTYDGCPPPFDNXXXXXXXX 345
N P+ GP HFR P KI W+TVRGMIPHKT+RG+ A RL+ Y+ PP+D
Sbjct: 2 NTKPSHGPIHFRSPAKILWRTVRGMIPHKTKRGEAALARLKAYEVVTPPYDRTKRMVIPD 61
Query: 344 XXXVFCXKPGRNYCHVGRLSHEIGWKYRDVVR 249
V +PG YC +G+LS E+GW Y D +R
Sbjct: 62 ALKVLRLQPGHKYCLLGQLSKEVGWNYYDTIR 93
>11_04_0056 + 12942802-12942920,12943022-12943115
Length = 70
Score = 54.4 bits (125), Expect = 6e-08
Identities = 23/56 (41%), Positives = 31/56 (55%)
Frame = -1
Query: 431 RGKNAXRRLRTYDGCPPPFDNXXXXXXXXXXXVFCXKPGRNYCHVGRLSHEIGWKY 264
RG+ A RL+ Y+G PPP+D V +PG YC +G+LS E+GW Y
Sbjct: 9 RGEAALARLKAYEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGQLSKEVGWNY 64
>04_03_0232 - 13049649-13052807
Length = 1052
Score = 31.1 bits (67), Expect = 0.65
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 221 PCPSSCLQAYEQHHGISIQFHGTVCLH 301
PCPS+CL+ Y H IS+Q LH
Sbjct: 763 PCPSNCLKPYSAHCYISVQDEMQTNLH 789
>01_06_0134 +
26805329-26805430,26807130-26807230,26807876-26808032,
26808386-26808582,26809188-26809287,26809501-26809536
Length = 230
Score = 30.7 bits (66), Expect = 0.86
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -2
Query: 283 MKLDGNTVMLFVSLKTRGRARLLRELPMKRNLRGSPRMLVRRCRRRQHHSLPS 125
MK D +L VS LL+EL ++ LR ++ RCR+ HH + S
Sbjct: 92 MKEDATKQLLRVSHNHHEYKNLLKELVVQGLLRLKEPAVLLRCRKEDHHHVES 144
>04_01_0084 - 912255-912368,912738-912822,914050-917105,920290-920508
Length = 1157
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -3
Query: 168 W*EGVEGDNTIHYHHPILWIQLGLRNYNKNKPFG 67
W +G++ D + HHP L++ R Y K P G
Sbjct: 1055 WWDGLQWDGLENGHHPSLYVPTHSRYYKKKLPRG 1088
>05_03_0238 - 10783451-10783735,10784686-10785762
Length = 453
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 293 RLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGE 162
+L +EI RD+ ++ EDK +K A E K ++ K E
Sbjct: 177 KLGNEIDKTRRDITKQFEDKGNKLEIKMKALEGKTDKLDKSLAE 220
>05_01_0301 - 2356880-2357959
Length = 359
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 250 VSLKTRGRARLLRELPMKRNLRGSPRMLVRRCR-RRQHHSLPSSNP 116
V LKT G LLR +P+ + R+ +R CR R + P + P
Sbjct: 76 VVLKTCGTTPLLRAVPVLLRAAAALRLRLRSCRYSRGEYLFPEAQP 121
>02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622
Length = 501
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 302 HVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAY-EKKLKRITKDAG 165
H G E G +VVR L D +GKAV+R+ +++L+ + + G
Sbjct: 165 HGGGGEEEAGVVDDEVVRVLRDAEEGKAVERLLLADRQLRHLPEQLG 211
>12_01_0645 - 5468344-5470266
Length = 640
Score = 27.5 bits (58), Expect = 8.0
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -1
Query: 311 NYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAY-EKKLKRITKDAGEKVSKATTPF 135
+Y +G L E W+ RD V +LED AV AY EKK K G+ S +
Sbjct: 59 SYSGLGVLLDESLWRLRDAVEELED-----AVDEHAYHEKKTKEREVSDGDLGSSFSKMK 113
Query: 134 TTIIQS 117
+I+S
Sbjct: 114 QRVIKS 119
>10_01_0326 +
3574129-3574329,3575144-3575692,3575914-3576072,
3576349-3577543,3577626-3577762,3578052-3578242,
3578888-3579218
Length = 920
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = -2
Query: 223 RLLRELPMKRNLRGSPRMLVRRCRRRQ 143
R++ EL + RN+R +P+ML+ ++R+
Sbjct: 177 RIVEELGLARNVRLTPKMLIEAIKQRK 203
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,819,588
Number of Sequences: 37544
Number of extensions: 266523
Number of successful extensions: 667
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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