Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_M07
(489 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for ... 219 4e-57
BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein. 219 4e-57
BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11 p... 219 4e-57
BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11 p... 219 4e-57
BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11 p... 219 4e-57
BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein. 219 4e-57
BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11 p... 219 4e-57
BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11 p... 219 4e-57
AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11 p... 219 4e-57
AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11 p... 136 4e-32
>X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for
ribosomal protein S11. ).
Length = 158
Score = 219 bits (535), Expect = 4e-57
Identities = 99/114 (86%), Positives = 108/114 (94%)
Frame = +2
Query: 104 KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIR 283
K K R++KN+GLGFKTP+EAIEGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVIR
Sbjct: 30 KEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIR 89
Query: 284 RDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPLSKTVRFNVL 445
RDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GEC PLSKTVRFNVL
Sbjct: 90 RDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVL 143
>BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 219 bits (535), Expect = 4e-57
Identities = 99/114 (86%), Positives = 108/114 (94%)
Frame = +2
Query: 104 KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIR 283
K K R++KN+GLGFKTP+EAIEGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVIR
Sbjct: 30 KEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIR 89
Query: 284 RDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPLSKTVRFNVL 445
RDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GEC PLSKTVRFNVL
Sbjct: 90 RDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVL 143
>BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 219 bits (535), Expect = 4e-57
Identities = 99/114 (86%), Positives = 108/114 (94%)
Frame = +2
Query: 104 KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIR 283
K K R++KN+GLGFKTP+EAIEGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVIR
Sbjct: 30 KEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIR 89
Query: 284 RDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPLSKTVRFNVL 445
RDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GEC PLSKTVRFNVL
Sbjct: 90 RDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVL 143
>BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 219 bits (535), Expect = 4e-57
Identities = 99/114 (86%), Positives = 108/114 (94%)
Frame = +2
Query: 104 KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIR 283
K K R++KN+GLGFKTP+EAIEGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVIR
Sbjct: 30 KEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIR 89
Query: 284 RDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPLSKTVRFNVL 445
RDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GEC PLSKTVRFNVL
Sbjct: 90 RDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVL 143
>BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 219 bits (535), Expect = 4e-57
Identities = 99/114 (86%), Positives = 108/114 (94%)
Frame = +2
Query: 104 KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIR 283
K K R++KN+GLGFKTP+EAIEGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVIR
Sbjct: 30 KEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIR 89
Query: 284 RDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPLSKTVRFNVL 445
RDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GEC PLSKTVRFNVL
Sbjct: 90 RDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVL 143
>BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 219 bits (535), Expect = 4e-57
Identities = 99/114 (86%), Positives = 108/114 (94%)
Frame = +2
Query: 104 KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIR 283
K K R++KN+GLGFKTP+EAIEGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVIR
Sbjct: 30 KEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIR 89
Query: 284 RDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPLSKTVRFNVL 445
RDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GEC PLSKTVRFNVL
Sbjct: 90 RDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVL 143
>BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 219 bits (535), Expect = 4e-57
Identities = 99/114 (86%), Positives = 108/114 (94%)
Frame = +2
Query: 104 KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIR 283
K K R++KN+GLGFKTP+EAIEGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVIR
Sbjct: 30 KEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIR 89
Query: 284 RDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPLSKTVRFNVL 445
RDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GEC PLSKTVRFNVL
Sbjct: 90 RDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVL 143
>BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 219 bits (535), Expect = 4e-57
Identities = 99/114 (86%), Positives = 108/114 (94%)
Frame = +2
Query: 104 KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIR 283
K K R++KN+GLGFKTP+EAIEGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVIR
Sbjct: 30 KEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIR 89
Query: 284 RDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPLSKTVRFNVL 445
RDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GEC PLSKTVRFNVL
Sbjct: 90 RDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVL 143
>AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 219 bits (535), Expect = 4e-57
Identities = 99/114 (86%), Positives = 108/114 (94%)
Frame = +2
Query: 104 KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIR 283
K K R++KN+GLGFKTP+EAIEGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVIR
Sbjct: 30 KEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIR 89
Query: 284 RDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPLSKTVRFNVL 445
RDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GEC PLSKTVRFNVL
Sbjct: 90 RDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVL 143
>AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11
protein.
Length = 83
Score = 136 bits (329), Expect = 4e-32
Identities = 61/68 (89%), Positives = 65/68 (95%)
Frame = +2
Query: 242 VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECXPLS 421
VV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GEC PLS
Sbjct: 1 VVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLS 60
Query: 422 KTVRFNVL 445
KTVRFNVL
Sbjct: 61 KTVRFNVL 68
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,449,798
Number of Sequences: 237096
Number of extensions: 1336734
Number of successful extensions: 2604
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2604
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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