Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_L19
         (652 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0659 - 24797477-24797533,24797614-24797726,24797814-247979...    88   7e-18
04_04_0506 - 25723809-25724299,25725082-25725237,25725316-257254...    85   5e-17
11_06_0628 - 25643006-25643123,25643314-25643471,25643559-256436...    36   0.028
03_05_0161 + 21400580-21401695                                         30   1.8  
09_04_0703 - 19614057-19614264,19615305-19615407,19615880-196159...    28   7.4  

>02_04_0659 -
           24797477-24797533,24797614-24797726,24797814-24797943,
           24798727-24798828,24798951-24798953
          Length = 134

 Score = 87.8 bits (208), Expect = 7e-18
 Identities = 47/113 (41%), Positives = 65/113 (57%)
 Frame = +3

Query: 312 GRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYAFTAP 491
           GRVALV  G   G+LV +VDV+DQ RALVD P   + R QI   +L LT  ++       
Sbjct: 10  GRVALVNYGKDYGRLVVIVDVVDQNRALVDAPD--MVRCQINFKRLSLTDIKIDIKRVPK 67

Query: 492 TRLVRKAWTDAKLNEKWTESQWAXKLANKEKRAQMTDYDRFKLTAARVKRNRA 650
              + KA  +A +  KW  S W  KL  +++RA + D+DRFK+  A++KR  A
Sbjct: 68  KTTLIKAMEEADVKNKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 120


>04_04_0506 -
           25723809-25724299,25725082-25725237,25725316-25725445,
           25726484-25726585,25726630-25726671
          Length = 306

 Score = 85.0 bits (201), Expect = 5e-17
 Identities = 45/109 (41%), Positives = 63/109 (57%)
 Frame = +3

Query: 312 GRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYAFTAP 491
           GRVALV  G   G+LV +VDV+DQ RALVD P   + R QI   +L LT  ++       
Sbjct: 23  GRVALVNYGKDYGRLVVIVDVVDQNRALVDAPD--MVRCQINFKRLSLTDIKIDIKRVPK 80

Query: 492 TRLVRKAWTDAKLNEKWTESQWAXKLANKEKRAQMTDYDRFKLTAARVK 638
              + KA  +A +  KW  S W  KL  +++RA + D+DRFK+  A++K
Sbjct: 81  KTTLIKAMEEADVKNKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 129


>11_06_0628 -
           25643006-25643123,25643314-25643471,25643559-25643687,
           25644378-25644451,25644771-25644798
          Length = 168

 Score = 35.9 bits (79), Expect = 0.028
 Identities = 13/38 (34%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
 Frame = +2

Query: 86  MKIYKDIITGDEMFSDTYKMKLVDE-VIYEVTGRLVTR 196
           M +Y+D++TGDE+ SD++  + ++  +++EV G+ V +
Sbjct: 1   MLVYQDLLTGDELLSDSFPYREIENGILWEVDGKWVVQ 38


>03_05_0161 + 21400580-21401695
          Length = 371

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 448 SWFKRICCLGTPLPGPSTSARVWSITSTTLTN 353
           SWF   C  G P P P  +A V + TS+ L +
Sbjct: 308 SWFMDSCSYGLPSPPPPATAAVAATTSSNLNS 339


>09_04_0703 -
           19614057-19614264,19615305-19615407,19615880-19615973,
           19616216-19616229,19616384-19616595,19617653-19617940,
           19618275-19618362,19618444-19618515,19618597-19618672,
           19618755-19618813,19618953-19619016,19619253-19619402
          Length = 475

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -1

Query: 238 QEGLKPSIWISALCSRHQPTGHFVNNFIDQFH 143
           ++G KPSIW + +   + P G   +   DQ+H
Sbjct: 57  EDGRKPSIWDTFINQGYMPDGSNADVSADQYH 88


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,176,961
Number of Sequences: 37544
Number of extensions: 363181
Number of successful extensions: 898
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)