Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_L19
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81461-2|CAB03835.1|  135|Caenorhabditis elegans Hypothetical pr...    98   5e-21
Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical p...    52   5e-07
Z98866-16|CAB11565.2| 1159|Caenorhabditis elegans Hypothetical p...    28   5.0  
U00068-1|AAA50745.1|   85|Caenorhabditis elegans Hypothetical pr...    28   5.0  

>Z81461-2|CAB03835.1|  135|Caenorhabditis elegans Hypothetical
           protein C04F12.4 protein.
          Length = 135

 Score = 97.9 bits (233), Expect = 5e-21
 Identities = 49/112 (43%), Positives = 70/112 (62%)
 Frame = +3

Query: 312 GRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYAFTAP 491
           GRV  +A G  +GKL ++V+VID  R  +DGP S V R    L  L LTKF LK      
Sbjct: 10  GRVVFIASGKDQGKLAAIVNVIDGNRVQIDGPSSDVTRTVRNLKDLQLTKFVLKLRVGQR 69

Query: 492 TRLVRKAWTDAKLNEKWTESQWAXKLANKEKRAQMTDYDRFKLTAARVKRNR 647
           T+ V+ A+  AK+ E + ++QWA K+A +  RA++TD++R+KL  A+  RNR
Sbjct: 70  TKGVKAAFDAAKVTENFQKTQWAKKIAQRAIRAKLTDFERYKLMKAKQMRNR 121


>Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical
           protein F25H2.11 protein.
          Length = 181

 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 22/40 (55%), Positives = 30/40 (75%)
 Frame = +2

Query: 86  MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQG 205
           M IYKDI T DE+ SD++ MKLVD+++YE  G+ V R +G
Sbjct: 1   MLIYKDIFTDDELSSDSFPMKLVDDLVYEFKGKHVVRKEG 40


>Z98866-16|CAB11565.2| 1159|Caenorhabditis elegans Hypothetical
           protein Y49E10.19 protein.
          Length = 1159

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 546 ESQWAXKLANKEKRAQMTDYDRFKLTAARV 635
           E+QWA     ++ RA +T+YDR K    R+
Sbjct: 807 EAQWAMLRHVEKHRALLTEYDRLKRDGPRI 836


>U00068-1|AAA50745.1|   85|Caenorhabditis elegans Hypothetical
           protein W04D12.1 protein.
          Length = 85

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 531 NEKWTESQWAXKLANKEKRAQMTDYDRFK 617
           N KW     A K+A KEK+ +M D ++ K
Sbjct: 43  NRKWKRIDSAVKVAKKEKKKKMKDEEKKK 71


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,744,688
Number of Sequences: 27780
Number of extensions: 312054
Number of successful extensions: 796
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)