Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_L15
(651 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces p... 181 7e-47
SPCC777.09c |arg1||acetylornithine aminotransferase|Schizosaccha... 83 3e-17
SPAC1039.07c |||4-aminobutyrate aminotransferase |Schizosaccharo... 47 2e-06
SPCC417.11c |||glutamate-1-semialdehyde 2,1-aminomutaseaminotran... 46 5e-06
SPBC1773.03c |||aminotransferase class-III, unknown specificty|S... 38 0.001
SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyce... 27 1.8
SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit S5|S... 26 4.1
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 26 4.1
SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr ... 25 7.2
SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||... 25 9.5
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k... 25 9.5
>SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 438
Score = 181 bits (441), Expect = 7e-47
Identities = 79/135 (58%), Positives = 101/135 (74%)
Frame = +3
Query: 189 PXPVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFY 368
P PV + +G VWD EG++Y DFLSAYSAVNQGHCHP+IIEAL +QA +TL SRAFY
Sbjct: 30 PLPVCFSKAKGAKVWDPEGREYLDFLSAYSAVNQGHCHPKIIEALVEQAQRVTLSSRAFY 89
Query: 369 SDQLGKYEKYMTELFGYDRLLPMNTGVEGGESACKIARKWGYEVKKIPEGQAKIIFAEGN 548
+D+ G + KY+TE FGY+ ++PMNTG E E+ACK+AR WGY+ KKIP +A I+ N
Sbjct: 90 NDKFGPFAKYITEYFGYEMVIPMNTGAEAVETACKLARLWGYKAKKIPTDEAIILSCVDN 149
Query: 549 FWGRTLSAVSSSSDP 593
F GRT+ +S S+DP
Sbjct: 150 FHGRTMGIISMSTDP 164
Score = 28.7 bits (61), Expect = 0.77
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 116 MAEQNLSSKEIFQLEDKYGCRNYAPLXCCF 205
+ S+++I LE++Y NY PL CF
Sbjct: 6 LLHNTFSTEQIEVLENEYAAHNYHPLPVCF 35
>SPCC777.09c |arg1||acetylornithine
aminotransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 441
Score = 83.4 bits (197), Expect = 3e-17
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 7/155 (4%)
Frame = +3
Query: 171 VVEITLPXPVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTL 350
++ + PV +GEG +++D EG+KY DF S + + GH HP + Q L
Sbjct: 47 IISVYARYPVVAAKGEGSYLFDKEGRKYIDFTSGVAVTSLGHAHPEVARLAADQCSKLVH 106
Query: 351 VSRAFYSDQLGKYEKYMTE-------LFGYDRLLPMNTGVEGGESACKIARKWGYEVKKI 509
S FY++ + + + G ++ N G E E+A K ARK +E K
Sbjct: 107 SSNLFYNEPAIELSNVINNSLAKNSGIAGPTKIFFANCGTEANETALKFARKAAFE--KY 164
Query: 510 PEGQAKIIFAEGNFWGRTLSAVSSSSDPTCYQGLR 614
EG+++I++ +F GR+L ++S +++P +G +
Sbjct: 165 GEGKSQIVYFNNSFHGRSLGSLSITANPKYKRGFQ 199
>SPAC1039.07c |||4-aminobutyrate aminotransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 47.2 bits (107), Expect = 2e-06
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +3
Query: 195 PVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFYSD 374
P + R +G V+D + DF S + GH HP I ++K L + F S
Sbjct: 33 PKIIVRAKGCCVYDEQDNAILDFTSGQMSAILGHSHPDITACIEKNLPKLVHLFSGFLSP 92
Query: 375 QLGKYEKYMTELF--GYDRLLPMNTGVEGGESACKIAR 482
+ + +++L G D+ L ++TG E E+A ++A+
Sbjct: 93 PVVQLATELSDLLPDGLDKTLFLSTGGEANEAALRMAK 130
>SPCC417.11c |||glutamate-1-semialdehyde
2,1-aminomutaseaminotransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 435
Score = 46.0 bits (104), Expect = 5e-06
Identities = 34/127 (26%), Positives = 58/127 (45%)
Frame = +3
Query: 189 PXPVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFY 368
P P+ + G G + DV+G +Y DFL+ +A GH +P I +AL + D + +
Sbjct: 50 PFPIFIEAGYGSKLRDVDGHEYTDFLNELTAGIYGHSNPVIKKALMQGFDEIGISLGGTT 109
Query: 369 SDQLGKYEKYMTELFGYDRLLPMNTGVEGGESACKIARKWGYEVKKIPEGQAKIIFAEGN 548
+ +L E + +++ N+G E +A ARK+ G+ +I G
Sbjct: 110 TCELNYAEALKSRFLSIEKIRFCNSGTEANITAIIAARKF--------TGKRAVIAMHGG 161
Query: 549 FWGRTLS 569
+ G LS
Sbjct: 162 YHGGPLS 168
>SPBC1773.03c |||aminotransferase class-III, unknown
specificty|Schizosaccharomyces pombe|chr 2|||Manual
Length = 459
Score = 37.9 bits (84), Expect = 0.001
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 3/131 (2%)
Frame = +3
Query: 195 PVALCRGEGVFVWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLV-SRAFYS 371
P + R EGV+++ +G + D + GH + +I+A+ KQ++ + + S F +
Sbjct: 28 PPTVVRAEGVYLYLEDGTRIMDATGGAAVACLGHGNKEVIDAMHKQSEKVCYIHSMGFSN 87
Query: 372 DQLGKYEKYMTELFG--YDRLLPMNTGVEGGESACKIARKWGYEVKKIPEGQAKIIFAEG 545
+ K + + R N+G E E+ K+ ++ V + + + II +
Sbjct: 88 EPADKLANLLVSEHPDVFARAYFANSGSEAVETCLKLILQYWQLVGE--KQRCHIIARKQ 145
Query: 546 NFWGRTLSAVS 578
+ G TL A+S
Sbjct: 146 GYHGNTLFALS 156
>SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1261
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 240 EGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSR 359
E Y + + AY +VN G I+E LK++ L +V+R
Sbjct: 1180 EPSTYENMVRAYLSVNDGRKAMEIVEQLKRKRYPLPVVNR 1219
>SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 26.2 bits (55), Expect = 4.1
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +3
Query: 249 KYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFYSDQLGKYEKYMTELFGYDRL 428
++ D L Y N HP IEAL+K + Y + K +KY+T L GY L
Sbjct: 111 RFKDHLPFYE--NYIRNHPLAIEALQKSTAPRQTGLKLNY---VSKLDKYVTPLDGYSHL 165
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -3
Query: 499 TSYPHLRAILHALSPPSTPVFIGSRRSYPNN 407
T+ P+L ++H+ S ++PVFI + RS +N
Sbjct: 7 TNTPNLPNLIHSESITNSPVFIPNLRSKSDN 37
>SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1026
Score = 25.4 bits (53), Expect = 7.2
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Frame = +3
Query: 24 RRHTLX-CRTVRLKQQRRHNSTVPYRNNFVKLWLNKICHLKKFSSWKTNMVVEITLP--- 191
RR TL C + LK R +N+ + F+K++L +I + + ++W + I P
Sbjct: 101 RRATLQLCDGLCLKLFRLNNNFLAVTGTFLKIYLIRISNFQIVATWTGHEDWPILFPFKD 160
Query: 192 ----XPVALCRGEGVFVWDVE 242
PVA G V +W V+
Sbjct: 161 EALLIPVAYSDG-SVSLWSVD 180
>SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1260
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3
Query: 100 LRYGTVLLCLRCCFNLTVRXQRVCLRP 20
+ Y +V+ CLR N + CL+P
Sbjct: 1022 ITYSSVIYCLRSIINQDIPLNEGCLKP 1048
>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 836
Score = 25.0 bits (52), Expect = 9.5
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -3
Query: 472 LHALSPPSTPVFIGSRRSYPNNSVIYFSYLPS*SE*NALDTSVKLSA 332
L A S PVF+ S+R Y +NS I + S N D + + SA
Sbjct: 40 LRAHSTFKEPVFLLSQRQYSHNSKILTELINSVKRPNKPDQNEEKSA 86
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,834,161
Number of Sequences: 5004
Number of extensions: 60034
Number of successful extensions: 186
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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