Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_L11
         (456 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50873-3|CAA90761.4|  531|Caenorhabditis elegans Hypothetical pr...    27   4.9  
Z34989-1|CAA84441.1|  404|Caenorhabditis elegans Ndr protein kin...    27   8.6  
U41027-7|AAP46276.1| 1465|Caenorhabditis elegans Hypothetical pr...    27   8.6  
U41027-6|AAC48194.5| 1512|Caenorhabditis elegans Hypothetical pr...    27   8.6  
U41016-7|ABC71807.1|  476|Caenorhabditis elegans Sensory axon gu...    27   8.6  
U41016-6|ABC71808.1|  474|Caenorhabditis elegans Sensory axon gu...    27   8.6  
AF275634-1|AAF91417.1|  469|Caenorhabditis elegans SAX-1 Ndr pro...    27   8.6  

>Z50873-3|CAA90761.4|  531|Caenorhabditis elegans Hypothetical
           protein F17E5.2 protein.
          Length = 531

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 291 IDLEELSEPTTTLQPAQQSSESPLLSG 371
           IDL+ + E   T+QP + S   PL+ G
Sbjct: 23  IDLKNIGEHARTVQPFKTSKHQPLIQG 49


>Z34989-1|CAA84441.1|  404|Caenorhabditis elegans Ndr protein kinase
           protein.
          Length = 404

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +3

Query: 261 SFDRTTSFDSIDLEELSEPTTTL-QPAQQ 344
           S D T++FD    E+L+ PT+TL +P +Q
Sbjct: 344 SIDDTSNFDDFPDEDLTWPTSTLIRPEEQ 372


>U41027-7|AAP46276.1| 1465|Caenorhabditis elegans Hypothetical
           protein R08E3.1b protein.
          Length = 1465

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -3

Query: 451 CSXTTQAMLTSNHAAFITIVIRSTNPTPLRRGDSED 344
           CS T Q   +S++  F+T V+  T+ +  R  D  D
Sbjct: 159 CSETAQTEQSSDYGTFLTKVMNVTSKSQQRPNDPSD 194


>U41027-6|AAC48194.5| 1512|Caenorhabditis elegans Hypothetical
           protein R08E3.1a protein.
          Length = 1512

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -3

Query: 451 CSXTTQAMLTSNHAAFITIVIRSTNPTPLRRGDSED 344
           CS T Q   +S++  F+T V+  T+ +  R  D  D
Sbjct: 159 CSETAQTEQSSDYGTFLTKVMNVTSKSQQRPNDPSD 194


>U41016-7|ABC71807.1|  476|Caenorhabditis elegans Sensory axon
           guidance protein 1,isoform a protein.
          Length = 476

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +3

Query: 261 SFDRTTSFDSIDLEELSEPTTTL-QPAQQ 344
           S D T++FD    E+L+ PT+TL +P +Q
Sbjct: 402 SIDDTSNFDDFPDEDLTWPTSTLIRPEEQ 430


>U41016-6|ABC71808.1|  474|Caenorhabditis elegans Sensory axon
           guidance protein 1,isoform b protein.
          Length = 474

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +3

Query: 261 SFDRTTSFDSIDLEELSEPTTTL-QPAQQ 344
           S D T++FD    E+L+ PT+TL +P +Q
Sbjct: 402 SIDDTSNFDDFPDEDLTWPTSTLIRPEEQ 430


>AF275634-1|AAF91417.1|  469|Caenorhabditis elegans SAX-1 Ndr
           protein kinase protein.
          Length = 469

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +3

Query: 261 SFDRTTSFDSIDLEELSEPTTTL-QPAQQ 344
           S D T++FD    E+L+ PT+TL +P +Q
Sbjct: 395 SIDDTSNFDDFPDEDLTWPTSTLIRPEEQ 423


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,549,006
Number of Sequences: 27780
Number of extensions: 196476
Number of successful extensions: 492
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)