Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_K22
         (615 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0167 - 1159231-1159263,1159348-1159419,1159957-1160052,116...   129   1e-30
08_01_0352 + 3102552-3105243,3105684-3105748,3105824-3106492           30   1.7  
06_02_0051 - 10957857-10958127,10959791-10960035,10960160-109602...    29   3.9  
08_02_0243 - 14708055-14708416,14708487-14709324,14709482-147103...    28   5.1  
01_01_0766 - 5928283-5929092                                           28   6.8  
12_02_0581 - 20785198-20785962,20786107-20786649                       27   8.9  
02_01_0620 + 4650572-4650671,4650755-4650891,4651012-4651205,465...    27   8.9  

>02_01_0167 -
           1159231-1159263,1159348-1159419,1159957-1160052,
           1160248-1160358,1160768-1160800,1160963-1161076
          Length = 152

 Score =  129 bits (312), Expect = 1e-30
 Identities = 66/121 (54%), Positives = 85/121 (70%), Gaps = 2/121 (1%)
 Frame = +1

Query: 160 KPVDREKTCPLLLRVFCSTGRHNSPGDY-VRGNVPQNELQIYTWMDATLRELTGLVKEVN 336
           +PVDREKTCPLLLRVF   G H+   ++ VRG  P++E+QIYTW DATLRELT LVKEV 
Sbjct: 32  EPVDREKTCPLLLRVFTKVGGHHQNEEFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVA 91

Query: 337 PETRRKGTYFDFAIVYPDMRSPTYRMREIGVTCS-GQRGGDDNKTLSQLKFQIGNYLDIS 513
              R++     FA VYPD +   + ++E+G T S G   GDD KTL++L FQIG+YL ++
Sbjct: 92  LAARKRNARLSFAFVYPD-KHGRFVVKEVGSTFSYGHGRGDDAKTLAELGFQIGDYLSVA 150

Query: 514 I 516
           I
Sbjct: 151 I 151


>08_01_0352 + 3102552-3105243,3105684-3105748,3105824-3106492
          Length = 1141

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -1

Query: 417 PHTICRRTHIRIHNGKIKVCAFPSRLR 337
           P   CRR  I  HN +IK  + PSRLR
Sbjct: 530 PEYRCRRLSIHEHNDRIKSVSDPSRLR 556


>06_02_0051 -
           10957857-10958127,10959791-10960035,10960160-10960229,
           10960319-10960986
          Length = 417

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 295 ATLRELTGLVKEVNPETRRKGTYFDFAIV-YPDMRSPTYRMRE 420
           A LRE++G ++  +   + K   FD ++   PD   P  R+RE
Sbjct: 93  ARLREISGTIRSRHGRVQTKAVVFDLSLASTPDGDQPLRRLRE 135


>08_02_0243 -
           14708055-14708416,14708487-14709324,14709482-14710323,
           14710466-14710520,14711535-14711549,14713030-14713033,
           14713340-14713424,14714045-14714084
          Length = 746

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 21/63 (33%), Positives = 29/63 (46%)
 Frame = -2

Query: 476 CESVLLSSPPLCPEHVTPISLIRYVGERISGYTMAKSKYVPFRLVSGLTSFTSPVSSRSV 297
           C+ VL S     P        I+YV ER+   TM    +VP  + S  T   + V SR V
Sbjct: 145 CDRVLFSRLAQLPLDYRIARRIKYVNERLVQITMNSKMFVPLAMRSPQTLQRNGV-SRYV 203

Query: 296 ASI 288
           A++
Sbjct: 204 AAL 206


>01_01_0766 - 5928283-5929092
          Length = 269

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +2

Query: 194 CSVCFVQLADIILLETMLEETYLRMNYKYIHGWMLHCEN 310
           CS C+    D+ LLE  L+E    +  K++H  +  CEN
Sbjct: 80  CSTCYEMKVDMGLLEMELKE----LKEKFVHDRIGRCEN 114


>12_02_0581 - 20785198-20785962,20786107-20786649
          Length = 435

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
 Frame = -2

Query: 464 LLSSPPLCPEHVTPISLIRYVGERISGYTMAKSKYVPFRLVSG--LTS---FTSPVSSRS 300
           +LSS  L    +T +S   Y+ +   GY     K +  RL S   +TS       V  ++
Sbjct: 91  ILSSYCLSLSDIT-LSFCSYIDDTGLGYLAFCKKLMTLRLNSAKRITSSGLLAVAVGCKN 149

Query: 299 VASIHVYICNSF*GTF 252
           +++IH+  CN   GTF
Sbjct: 150 LSAIHLINCNKISGTF 165


>02_01_0620 +
           4650572-4650671,4650755-4650891,4651012-4651205,
           4651287-4651571,4652111-4652169,4652469-4652540,
           4652817-4652925,4653239-4653980
          Length = 565

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -2

Query: 377 MAKSKYVPFRLVSGLTSFTSPVSSRSVASIHVYICNSF*GT-FPLT*SPGELCRPVE 210
           +A+SK V   LV+ L    + VS+ + A +   +  +  G   PL  SPGE C P E
Sbjct: 357 LARSKDVTHHLVTVLNGVIANVSNAAAAGLPPPLYYNQSGPPVPLLCSPGERCDPGE 413


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,069,693
Number of Sequences: 37544
Number of extensions: 335849
Number of successful extensions: 798
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)