Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_K22
(615 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U96915-1|AAC51322.1| 153|Homo sapiens sin3 associated polypepti... 180 4e-45
CR457035-1|CAG33316.1| 153|Homo sapiens SAP18 protein. 180 4e-45
BC030836-1|AAH30836.1| 153|Homo sapiens Sin3A-associated protei... 180 4e-45
AY550970-1|AAT52216.1| 153|Homo sapiens cell growth inhibiting ... 180 4e-45
AL158032-1|CAH69949.1| 153|Homo sapiens Sin3A-associated protei... 180 4e-45
AF153608-1|AAD41090.1| 153|Homo sapiens sin3 associated polypep... 180 4e-45
U78303-1|AAF21220.1| 153|Homo sapiens 2HOR0202 protein. 179 6e-45
BC001460-1|AAH01460.2| 1019|Homo sapiens La ribonucleoprotein do... 31 4.3
BC125192-1|AAI25193.1| 687|Homo sapiens ZNF778 protein protein. 29 9.9
>U96915-1|AAC51322.1| 153|Homo sapiens sin3 associated polypeptide
p18 protein.
Length = 153
Score = 180 bits (438), Expect = 4e-45
Identities = 88/136 (64%), Positives = 109/136 (80%), Gaps = 3/136 (2%)
Frame = +1
Query: 121 LESMVV-EEIKPT-EKPVDREKTCPLLLRVFCST-GRHNSPGDYVRGNVPQNELQIYTWM 291
+ES V EEIK EKP+DREKTCPLLLRVF + GRH+ ++ RGNVP +ELQIYTWM
Sbjct: 3 VESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWM 62
Query: 292 DATLRELTGLVKEVNPETRRKGTYFDFAIVYPDMRSPTYRMREIGVTCSGQRGGDDNKTL 471
DATL+ELT LVKEV PE R+KGT+F+FAIV+ D++ P YR++EIG T SG++G DD+ TL
Sbjct: 63 DATLKELTSLVKEVYPEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMSGRKGTDDSMTL 122
Query: 472 SQLKFQIGNYLDISIT 519
KFQIG+YLDI+IT
Sbjct: 123 QSQKFQIGDYLDIAIT 138
>CR457035-1|CAG33316.1| 153|Homo sapiens SAP18 protein.
Length = 153
Score = 180 bits (438), Expect = 4e-45
Identities = 88/136 (64%), Positives = 109/136 (80%), Gaps = 3/136 (2%)
Frame = +1
Query: 121 LESMVV-EEIKPT-EKPVDREKTCPLLLRVFCST-GRHNSPGDYVRGNVPQNELQIYTWM 291
+ES V EEIK EKP+DREKTCPLLLRVF + GRH+ ++ RGNVP +ELQIYTWM
Sbjct: 3 VESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWM 62
Query: 292 DATLRELTGLVKEVNPETRRKGTYFDFAIVYPDMRSPTYRMREIGVTCSGQRGGDDNKTL 471
DATL+ELT LVKEV PE R+KGT+F+FAIV+ D++ P YR++EIG T SG++G DD+ TL
Sbjct: 63 DATLKELTSLVKEVYPEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMSGRKGTDDSMTL 122
Query: 472 SQLKFQIGNYLDISIT 519
KFQIG+YLDI+IT
Sbjct: 123 QSQKFQIGDYLDIAIT 138
>BC030836-1|AAH30836.1| 153|Homo sapiens Sin3A-associated protein,
18kDa protein.
Length = 153
Score = 180 bits (438), Expect = 4e-45
Identities = 88/136 (64%), Positives = 109/136 (80%), Gaps = 3/136 (2%)
Frame = +1
Query: 121 LESMVV-EEIKPT-EKPVDREKTCPLLLRVFCST-GRHNSPGDYVRGNVPQNELQIYTWM 291
+ES V EEIK EKP+DREKTCPLLLRVF + GRH+ ++ RGNVP +ELQIYTWM
Sbjct: 3 VESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWM 62
Query: 292 DATLRELTGLVKEVNPETRRKGTYFDFAIVYPDMRSPTYRMREIGVTCSGQRGGDDNKTL 471
DATL+ELT LVKEV PE R+KGT+F+FAIV+ D++ P YR++EIG T SG++G DD+ TL
Sbjct: 63 DATLKELTSLVKEVYPEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMSGRKGTDDSMTL 122
Query: 472 SQLKFQIGNYLDISIT 519
KFQIG+YLDI+IT
Sbjct: 123 QSQKFQIGDYLDIAIT 138
>AY550970-1|AAT52216.1| 153|Homo sapiens cell growth inhibiting
protein 38 protein.
Length = 153
Score = 180 bits (438), Expect = 4e-45
Identities = 88/136 (64%), Positives = 109/136 (80%), Gaps = 3/136 (2%)
Frame = +1
Query: 121 LESMVV-EEIKPT-EKPVDREKTCPLLLRVFCST-GRHNSPGDYVRGNVPQNELQIYTWM 291
+ES V EEIK EKP+DREKTCPLLLRVF + GRH+ ++ RGNVP +ELQIYTWM
Sbjct: 3 VESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWM 62
Query: 292 DATLRELTGLVKEVNPETRRKGTYFDFAIVYPDMRSPTYRMREIGVTCSGQRGGDDNKTL 471
DATL+ELT LVKEV PE R+KGT+F+FAIV+ D++ P YR++EIG T SG++G DD+ TL
Sbjct: 63 DATLKELTSLVKEVYPEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMSGRKGTDDSMTL 122
Query: 472 SQLKFQIGNYLDISIT 519
KFQIG+YLDI+IT
Sbjct: 123 QSQKFQIGDYLDIAIT 138
>AL158032-1|CAH69949.1| 153|Homo sapiens Sin3A-associated protein,
18kDa protein.
Length = 153
Score = 180 bits (438), Expect = 4e-45
Identities = 88/136 (64%), Positives = 109/136 (80%), Gaps = 3/136 (2%)
Frame = +1
Query: 121 LESMVV-EEIKPT-EKPVDREKTCPLLLRVFCST-GRHNSPGDYVRGNVPQNELQIYTWM 291
+ES V EEIK EKP+DREKTCPLLLRVF + GRH+ ++ RGNVP +ELQIYTWM
Sbjct: 3 VESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWM 62
Query: 292 DATLRELTGLVKEVNPETRRKGTYFDFAIVYPDMRSPTYRMREIGVTCSGQRGGDDNKTL 471
DATL+ELT LVKEV PE R+KGT+F+FAIV+ D++ P YR++EIG T SG++G DD+ TL
Sbjct: 63 DATLKELTSLVKEVYPEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMSGRKGTDDSMTL 122
Query: 472 SQLKFQIGNYLDISIT 519
KFQIG+YLDI+IT
Sbjct: 123 QSQKFQIGDYLDIAIT 138
>AF153608-1|AAD41090.1| 153|Homo sapiens sin3 associated
polypeptide protein.
Length = 153
Score = 180 bits (438), Expect = 4e-45
Identities = 88/136 (64%), Positives = 109/136 (80%), Gaps = 3/136 (2%)
Frame = +1
Query: 121 LESMVV-EEIKPT-EKPVDREKTCPLLLRVFCST-GRHNSPGDYVRGNVPQNELQIYTWM 291
+ES V EEIK EKP+DREKTCPLLLRVF + GRH+ ++ RGNVP +ELQIYTWM
Sbjct: 3 VESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWM 62
Query: 292 DATLRELTGLVKEVNPETRRKGTYFDFAIVYPDMRSPTYRMREIGVTCSGQRGGDDNKTL 471
DATL+ELT LVKEV PE R+KGT+F+FAIV+ D++ P YR++EIG T SG++G DD+ TL
Sbjct: 63 DATLKELTSLVKEVYPEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMSGRKGTDDSMTL 122
Query: 472 SQLKFQIGNYLDISIT 519
KFQIG+YLDI+IT
Sbjct: 123 QSQKFQIGDYLDIAIT 138
>U78303-1|AAF21220.1| 153|Homo sapiens 2HOR0202 protein.
Length = 153
Score = 179 bits (436), Expect = 6e-45
Identities = 88/136 (64%), Positives = 108/136 (79%), Gaps = 3/136 (2%)
Frame = +1
Query: 121 LESMVV-EEIKPT-EKPVDREKTCPLLLRVFCST-GRHNSPGDYVRGNVPQNELQIYTWM 291
+ES V EEIK EKP+DREKTCPLLLRVF + GRH+ ++ RGNVP +ELQIYTWM
Sbjct: 3 VESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWM 62
Query: 292 DATLRELTGLVKEVNPETRRKGTYFDFAIVYPDMRSPTYRMREIGVTCSGQRGGDDNKTL 471
DATL+ELT LVKEV PE R+KGT+F+FAIV+ D++ P YR++EIG T SG+ G DD+ TL
Sbjct: 63 DATLKELTSLVKEVYPEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMSGREGTDDSMTL 122
Query: 472 SQLKFQIGNYLDISIT 519
KFQIG+YLDI+IT
Sbjct: 123 QSQKFQIGDYLDIAIT 138
>BC001460-1|AAH01460.2| 1019|Homo sapiens La ribonucleoprotein
domain family, member 1 protein.
Length = 1019
Score = 30.7 bits (66), Expect = 4.3
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 91 NCPNIMKMAGLESMVVEEIKPTEKPV-DREKTCPLLLRVFCSTGRHNSPGDYVRGNVPQ 264
+CP ++ G ++ V P ++P DREK P + S H++P VR VP+
Sbjct: 27 SCPG--RLPGRKNSVALAAAPRKEPTGDREKPLPFPVLAPFSNPEHSAPAKVVRAAVPK 83
>BC125192-1|AAI25193.1| 687|Homo sapiens ZNF778 protein protein.
Length = 687
Score = 29.5 bits (63), Expect = 9.9
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -1
Query: 432 CNSYFPHTICRRTHIRIHNG-KIKVCAF 352
C YF ++ C H+RIH G K C++
Sbjct: 328 CGKYFRNSSCLNNHVRIHTGIKPYTCSY 355
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,424,163
Number of Sequences: 237096
Number of extensions: 1899126
Number of successful extensions: 4636
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4629
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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