Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_K22
         (615 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025229-1|ABF17920.1|  150|Drosophila melanogaster FI01006p pro...   213   1e-55
AF297546-1|AAG34996.1|  150|Drosophila melanogaster Sin3A-associ...   213   1e-55
AE014297-2162|AAF55284.1|  150|Drosophila melanogaster CG6046-PA...   213   1e-55
AY070913-1|AAL48535.1|  150|Drosophila melanogaster RE02417p pro...   211   5e-55
AJ278500-1|CAB95728.1|  140|Drosophila melanogaster SAP18 protei...   201   5e-52
AE014298-3039|ABI30990.1|  658|Drosophila melanogaster CG34145-P...    33   0.40 
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran...    29   5.0  
AE014297-3943|AAF56586.1|  269|Drosophila melanogaster CG14239-P...    29   6.6  
AE014296-3643|AAF51798.2| 1416|Drosophila melanogaster CG7464-PA...    29   6.6  

>BT025229-1|ABF17920.1|  150|Drosophila melanogaster FI01006p
           protein.
          Length = 150

 Score =  213 bits (521), Expect = 1e-55
 Identities = 97/136 (71%), Positives = 117/136 (86%)
 Frame = +1

Query: 112 MAGLESMVVEEIKPTEKPVDREKTCPLLLRVFCSTGRHNSPGDYVRGNVPQNELQIYTWM 291
           MA +ESM+VEE K   K +DREKTCP+LLRVFCSTGRH+S  +Y+ GNVP NELQIYTW 
Sbjct: 1   MANVESMIVEE-KTQVKQIDREKTCPMLLRVFCSTGRHHSVSEYMFGNVPTNELQIYTWQ 59

Query: 292 DATLRELTGLVKEVNPETRRKGTYFDFAIVYPDMRSPTYRMREIGVTCSGQRGGDDNKTL 471
           DATL ELT LV++VNP+TR+KGTYFDFA+VYP+ RS  ++MREIGVTC+GQ+G DDNKTL
Sbjct: 60  DATLHELTSLVRDVNPDTRKKGTYFDFAVVYPNFRSNHFQMREIGVTCTGQKGIDDNKTL 119

Query: 472 SQLKFQIGNYLDISIT 519
           +Q KF IG++LDISIT
Sbjct: 120 AQAKFSIGDFLDISIT 135


>AF297546-1|AAG34996.1|  150|Drosophila melanogaster
           Sin3A-associated polypeptide p18 protein.
          Length = 150

 Score =  213 bits (521), Expect = 1e-55
 Identities = 97/136 (71%), Positives = 117/136 (86%)
 Frame = +1

Query: 112 MAGLESMVVEEIKPTEKPVDREKTCPLLLRVFCSTGRHNSPGDYVRGNVPQNELQIYTWM 291
           MA +ESM+VEE K   K +DREKTCP+LLRVFCSTGRH+S  +Y+ GNVP NELQIYTW 
Sbjct: 1   MANVESMIVEE-KTQVKQIDREKTCPMLLRVFCSTGRHHSVSEYMFGNVPTNELQIYTWQ 59

Query: 292 DATLRELTGLVKEVNPETRRKGTYFDFAIVYPDMRSPTYRMREIGVTCSGQRGGDDNKTL 471
           DATL ELT LV++VNP+TR+KGTYFDFA+VYP+ RS  ++MREIGVTC+GQ+G DDNKTL
Sbjct: 60  DATLHELTSLVRDVNPDTRKKGTYFDFAVVYPNFRSNHFQMREIGVTCTGQKGIDDNKTL 119

Query: 472 SQLKFQIGNYLDISIT 519
           +Q KF IG++LDISIT
Sbjct: 120 AQAKFSIGDFLDISIT 135


>AE014297-2162|AAF55284.1|  150|Drosophila melanogaster CG6046-PA
           protein.
          Length = 150

 Score =  213 bits (521), Expect = 1e-55
 Identities = 97/136 (71%), Positives = 117/136 (86%)
 Frame = +1

Query: 112 MAGLESMVVEEIKPTEKPVDREKTCPLLLRVFCSTGRHNSPGDYVRGNVPQNELQIYTWM 291
           MA +ESM+VEE K   K +DREKTCP+LLRVFCSTGRH+S  +Y+ GNVP NELQIYTW 
Sbjct: 1   MANVESMIVEE-KTQVKQIDREKTCPMLLRVFCSTGRHHSVSEYMFGNVPTNELQIYTWQ 59

Query: 292 DATLRELTGLVKEVNPETRRKGTYFDFAIVYPDMRSPTYRMREIGVTCSGQRGGDDNKTL 471
           DATL ELT LV++VNP+TR+KGTYFDFA+VYP+ RS  ++MREIGVTC+GQ+G DDNKTL
Sbjct: 60  DATLHELTSLVRDVNPDTRKKGTYFDFAVVYPNFRSNHFQMREIGVTCTGQKGIDDNKTL 119

Query: 472 SQLKFQIGNYLDISIT 519
           +Q KF IG++LDISIT
Sbjct: 120 AQAKFSIGDFLDISIT 135


>AY070913-1|AAL48535.1|  150|Drosophila melanogaster RE02417p
           protein.
          Length = 150

 Score =  211 bits (516), Expect = 5e-55
 Identities = 96/136 (70%), Positives = 116/136 (85%)
 Frame = +1

Query: 112 MAGLESMVVEEIKPTEKPVDREKTCPLLLRVFCSTGRHNSPGDYVRGNVPQNELQIYTWM 291
           MA +ESM+VEE K   K +DREKTCP+LLRVFCSTGRH+S  +Y+ GNVP NELQIY W 
Sbjct: 1   MANVESMIVEE-KTQVKQIDREKTCPMLLRVFCSTGRHHSVSEYMFGNVPTNELQIYAWQ 59

Query: 292 DATLRELTGLVKEVNPETRRKGTYFDFAIVYPDMRSPTYRMREIGVTCSGQRGGDDNKTL 471
           DATL ELT LV++VNP+TR+KGTYFDFA+VYP+ RS  ++MREIGVTC+GQ+G DDNKTL
Sbjct: 60  DATLHELTSLVRDVNPDTRKKGTYFDFAVVYPNFRSNHFQMREIGVTCTGQKGIDDNKTL 119

Query: 472 SQLKFQIGNYLDISIT 519
           +Q KF IG++LDISIT
Sbjct: 120 AQAKFSIGDFLDISIT 135


>AJ278500-1|CAB95728.1|  140|Drosophila melanogaster SAP18 protein
           protein.
          Length = 140

 Score =  201 bits (491), Expect = 5e-52
 Identities = 89/124 (71%), Positives = 107/124 (86%)
 Frame = +1

Query: 148 KPTEKPVDREKTCPLLLRVFCSTGRHNSPGDYVRGNVPQNELQIYTWMDATLRELTGLVK 327
           K   K +DREKTCP+LLRVFCSTGRH+S  +Y+ GNVP NELQIYTW DATL ELT LV+
Sbjct: 2   KTQVKQIDREKTCPMLLRVFCSTGRHHSVSEYMFGNVPTNELQIYTWQDATLHELTSLVR 61

Query: 328 EVNPETRRKGTYFDFAIVYPDMRSPTYRMREIGVTCSGQRGGDDNKTLSQLKFQIGNYLD 507
           +VNP+TR+KGTYFDFA+VYP+ RS  ++MREIGVTC+GQ+G DDNKTL+Q KF IG++LD
Sbjct: 62  DVNPDTRKKGTYFDFAVVYPNFRSNHFQMREIGVTCTGQKGIDDNKTLAQAKFSIGDFLD 121

Query: 508 ISIT 519
           ISIT
Sbjct: 122 ISIT 125


>AE014298-3039|ABI30990.1|  658|Drosophila melanogaster CG34145-PA
           protein.
          Length = 658

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 20/64 (31%), Positives = 30/64 (46%)
 Frame = -2

Query: 458 SSPPLCPEHVTPISLIRYVGERISGYTMAKSKYVPFRLVSGLTSFTSPVSSRSVASIHVY 279
           S+ PL    + PI   +       GY  A S Y P+   SGL+S T+P S++       +
Sbjct: 247 STDPLSGFRMPPIGNCQSASNTHWGYGSAASAYSPYLASSGLSSCTTPTSAQFNNPALGF 306

Query: 278 ICNS 267
            C+S
Sbjct: 307 TCSS 310


>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
           transcriptase protein.
          Length = 1088

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +2

Query: 197 SVCFVQLADIILLETMLEETYLRMNYKYIHGWMLHCENLQDL*KKLILRRD 349
           ++C V L DII+  T L+E ++ +  K I G +        L K   LRR+
Sbjct: 354 TICLVYLDDIIIFSTSLQEHFIHL--KTIFGRLRSANFKVQLTKSYFLRRE 402


>AE014297-3943|AAF56586.1|  269|Drosophila melanogaster CG14239-PA
           protein.
          Length = 269

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -1

Query: 372 KIKVCAFPSRLRINFFYKSCKFSQCSIHPCI 280
           KI+ C FP  +  +  YKS  FS C I  CI
Sbjct: 87  KIRSCFFPEEIPADSLYKSYSFSVC-ITECI 116


>AE014296-3643|AAF51798.2| 1416|Drosophila melanogaster CG7464-PA
           protein.
          Length = 1416

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 564 IWLWTPHWWWHSVWGC 517
           +WLW P WW   VW C
Sbjct: 472 LWLW-PLWWLAQVWTC 486


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,596,987
Number of Sequences: 53049
Number of extensions: 602111
Number of successful extensions: 1494
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1490
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)