Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_K14
         (317 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0572 - 4044610-4044658,4044754-4044857,4044942-4044944           62   7e-11
02_05_1078 + 33946902-33946904,33947006-33947109,33947206-33947254     62   7e-11
02_05_1076 + 33932543-33932545,33932643-33932746,33932859-33932907     62   7e-11
07_01_1026 - 8865924-8866225,8867051-8867297,8867561-8867587           30   0.45 
07_03_0054 + 12848425-12848593,12850106-12850278                       27   4.2  
01_03_0025 + 11739930-11740493,11740820-11741020,11741143-117412...    26   5.6  
08_02_0946 + 22880399-22880600,22881588-22881650,22881786-228817...    26   7.4  
06_03_0375 + 20052687-20053214,20053943-20054110,20054272-200543...    26   7.4  
12_02_0825 + 23476943-23476952,23477263-23477328,23477737-234778...    25   9.7  
01_05_0120 - 18349131-18349880,18349972-18350259,18350383-18350568     25   9.7  

>06_01_0572 - 4044610-4044658,4044754-4044857,4044942-4044944
          Length = 51

 Score = 62.5 bits (145), Expect = 7e-11
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +3

Query: 105 PIPQWVRMRTGNTIRYNAKRRHWRRTKL 188
           PIP W+RMRT NTIRYNAKRRHWRRTKL
Sbjct: 22  PIPYWIRMRTDNTIRYNAKRRHWRRTKL 49


>02_05_1078 + 33946902-33946904,33947006-33947109,33947206-33947254
          Length = 51

 Score = 62.5 bits (145), Expect = 7e-11
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +3

Query: 105 PIPQWVRMRTGNTIRYNAKRRHWRRTKL 188
           PIP W+RMRT NTIRYNAKRRHWRRTKL
Sbjct: 22  PIPYWIRMRTDNTIRYNAKRRHWRRTKL 49


>02_05_1076 + 33932543-33932545,33932643-33932746,33932859-33932907
          Length = 51

 Score = 62.5 bits (145), Expect = 7e-11
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +3

Query: 105 PIPQWVRMRTGNTIRYNAKRRHWRRTKL 188
           PIP W+RMRT NTIRYNAKRRHWRRTKL
Sbjct: 22  PIPYWIRMRTDNTIRYNAKRRHWRRTKL 49


>07_01_1026 - 8865924-8866225,8867051-8867297,8867561-8867587
          Length = 191

 Score = 29.9 bits (64), Expect = 0.45
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 120 PTEEWVCFVSAFWPICALIINVLWADILNNQ 28
           P EEW   V+A WP+ A++I   W  IL+ Q
Sbjct: 164 PEEEWSMVVAAGWPVNAILI---WFKILDPQ 191


>07_03_0054 + 12848425-12848593,12850106-12850278
          Length = 113

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 215 FNTFTSLQLELCPSPVTPLSVISNSVSCA 129
           F T+ S+  +L PSP + L V   S+SC+
Sbjct: 8   FTTYVSIVPDLRPSPRSHLCVNHGSISCS 36


>01_03_0025 +
           11739930-11740493,11740820-11741020,11741143-11741235,
           11741355-11742125
          Length = 542

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 120 VRMRTGNTIRYNAKRRHWRRTKLKL 194
           ++ R    +R +  RRHWRR  L L
Sbjct: 75  IKARNSPLLRVSPFRRHWRRLSLSL 99


>08_02_0946 +
           22880399-22880600,22881588-22881650,22881786-22881790,
           22882143-22882253,22882339-22882443,22882529-22882609,
           22883236-22883247,22883680-22883733,22884476-22884586,
           22884789-22884935
          Length = 296

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 194 QLELCPSPVTPLSVISNSVSCAHPYPLRNGSVL 96
           Q  LCP P+T   +I N   C   YP  +  VL
Sbjct: 219 QSHLCPLPLTVQPIIWNYDHCLRLYPTPHTIVL 251


>06_03_0375 +
           20052687-20053214,20053943-20054110,20054272-20054354,
           20054541-20054610,20054973-20055077
          Length = 317

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 179 PSPVTPLSVISNSVSCAHPYPLRNGSVLFQLFGQF 75
           PSP  P +  ++  + A    LR G V F  FGQF
Sbjct: 53  PSPSEPTTAAASPATAAAAGALRVGIVGFGNFGQF 87


>12_02_0825 +
          23476943-23476952,23477263-23477328,23477737-23477885,
          23478148-23478212,23479247-23479710,23479724-23480208
          Length = 412

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 79 NLRXNNKRLMGRHFEQSSCQNKV 11
          N+  N KRL+GR F  +S Q+ +
Sbjct: 22 NMAENAKRLIGRRFTDASVQSDI 44


>01_05_0120 - 18349131-18349880,18349972-18350259,18350383-18350568
          Length = 407

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 118 G*GCAQETLFDITLRGVTGEGQSSSCKLV 204
           G   A  T+FDIT  G   +G++ S K V
Sbjct: 36  GLAAAVNTVFDITELGAVADGKTDSTKAV 64


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,796,558
Number of Sequences: 37544
Number of extensions: 90037
Number of successful extensions: 246
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 398975940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)