Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_K14
         (317 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071712-1|AAL49334.1|   51|Drosophila melanogaster RH27094p pro...    67   4e-12
AE013599-3798|AAF47154.1|   51|Drosophila melanogaster CG3997-PA...    67   4e-12
AF012422-1|AAB65802.1|   51|Drosophila melanogaster ribosomal pr...    65   2e-11
BT006012-1|AAO74695.1|  562|Drosophila melanogaster LD08641p pro...    27   5.2  
AY169964-1|AAO11676.1|  513|Drosophila melanogaster NINAD protein.     27   5.2  
AE014134-500|AAN10395.1|  562|Drosophila melanogaster CG2991-PC,...    27   5.2  
AE014134-499|AAF51190.1|  562|Drosophila melanogaster CG2991-PB,...    27   5.2  
AE014134-498|AAF51189.1|  562|Drosophila melanogaster CG2991-PA,...    27   5.2  

>AY071712-1|AAL49334.1|   51|Drosophila melanogaster RH27094p
           protein.
          Length = 51

 Score = 67.3 bits (157), Expect = 4e-12
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = +3

Query: 108 IPQWVRMRTGNTIRYNAKRRHWRRTKLKL 194
           +PQWVR+RTGNTIRYNAKRRHWRRTKLKL
Sbjct: 23  VPQWVRLRTGNTIRYNAKRRHWRRTKLKL 51


>AE013599-3798|AAF47154.1|   51|Drosophila melanogaster CG3997-PA
           protein.
          Length = 51

 Score = 67.3 bits (157), Expect = 4e-12
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = +3

Query: 108 IPQWVRMRTGNTIRYNAKRRHWRRTKLKL 194
           +PQWVR+RTGNTIRYNAKRRHWRRTKLKL
Sbjct: 23  VPQWVRLRTGNTIRYNAKRRHWRRTKLKL 51


>AF012422-1|AAB65802.1|   51|Drosophila melanogaster ribosomal
           protein 46 protein.
          Length = 51

 Score = 64.9 bits (151), Expect = 2e-11
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 108 IPQWVRMRTGNTIRYNAKRRHWRRTKLKL 194
           +PQWVR+ TGNTIRYNAKRRHWRRTKLKL
Sbjct: 23  VPQWVRLATGNTIRYNAKRRHWRRTKLKL 51


>BT006012-1|AAO74695.1|  562|Drosophila melanogaster LD08641p
           protein.
          Length = 562

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
 Frame = -3

Query: 111 EW-VCFVSAFWPI---CALIINVLWADILNNQVVKTKCQQF 1
           +W V  +SA++P+   CA +I  +WA+I + + ++ +  QF
Sbjct: 151 QWAVTLMSAYYPLLMTCASLIVCMWAEIFHLRDIRWEKSQF 191


>AY169964-1|AAO11676.1|  513|Drosophila melanogaster NINAD protein.
          Length = 513

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 8/41 (19%), Positives = 20/41 (48%)
 Frame = -3

Query: 141 CFLCASLPTEEWVCFVSAFWPICALIINVLWADILNNQVVK 19
           C  C     + WV  +  F+ +  L+  + W   ++++++K
Sbjct: 3   CSCCGVTQQKAWVFGLGTFFAVSGLLAIICWPGFIDSEIMK 43


>AE014134-500|AAN10395.1|  562|Drosophila melanogaster CG2991-PC,
           isoform C protein.
          Length = 562

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
 Frame = -3

Query: 111 EW-VCFVSAFWPI---CALIINVLWADILNNQVVKTKCQQF 1
           +W V  +SA++P+   CA +I  +WA+I + + ++ +  QF
Sbjct: 151 QWAVTLMSAYYPLLMTCASLIVCMWAEIFHLRDIRWEKSQF 191


>AE014134-499|AAF51190.1|  562|Drosophila melanogaster CG2991-PB,
           isoform B protein.
          Length = 562

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
 Frame = -3

Query: 111 EW-VCFVSAFWPI---CALIINVLWADILNNQVVKTKCQQF 1
           +W V  +SA++P+   CA +I  +WA+I + + ++ +  QF
Sbjct: 151 QWAVTLMSAYYPLLMTCASLIVCMWAEIFHLRDIRWEKSQF 191


>AE014134-498|AAF51189.1|  562|Drosophila melanogaster CG2991-PA,
           isoform A protein.
          Length = 562

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
 Frame = -3

Query: 111 EW-VCFVSAFWPI---CALIINVLWADILNNQVVKTKCQQF 1
           +W V  +SA++P+   CA +I  +WA+I + + ++ +  QF
Sbjct: 151 QWAVTLMSAYYPLLMTCASLIVCMWAEIFHLRDIRWEKSQF 191


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,011,145
Number of Sequences: 53049
Number of extensions: 161821
Number of successful extensions: 391
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 391
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 652945002
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)