Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_K14
         (317 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   3.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   3.6  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   4.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   4.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   4.7  
AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49 ...    20   6.3  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 129 ASLPTEEWVCFVSAFWPICALII 61
           ASLP   ++  V AF  +C + +
Sbjct: 296 ASLPPVSYLKAVDAFMSVCTVFV 318


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +2

Query: 5    CWHFVLTT 28
            CWH V+TT
Sbjct: 1466 CWHAVMTT 1473


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -3

Query: 135 LCASLPTEEWVCFVSAFWPICALIINVLWA 46
           LC    T + +C  ++   +CA+ ++  WA
Sbjct: 108 LCKLWLTCDVLCCTASILNLCAIALDRYWA 137


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -3

Query: 135 LCASLPTEEWVCFVSAFWPICALIINVLWA 46
           LC    T + +C  ++   +CA+ ++  WA
Sbjct: 108 LCKLWLTCDVLCCTASILNLCAIALDRYWA 137


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -3

Query: 135 LCASLPTEEWVCFVSAFWPICALIINVLWA 46
           LC    T + +C  ++   +CA+ ++  WA
Sbjct: 108 LCKLWLTCDVLCCTASILNLCAIALDRYWA 137


>AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49
           protein.
          Length = 134

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +3

Query: 147 RYNAKRRHWRRTK 185
           RY+  +R+WR+ K
Sbjct: 26  RYSKLKRNWRKPK 38


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,535
Number of Sequences: 438
Number of extensions: 1161
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6844365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)