Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_K13
(640 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 244 6e-65
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 244 6e-65
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 244 6e-65
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 196 1e-50
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 150 7e-37
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 150 7e-37
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 130 6e-31
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 89 2e-18
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 72 4e-13
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 72 4e-13
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 72 4e-13
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 72 4e-13
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 72 4e-13
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 0.005
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 33 0.23
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.23
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.23
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.92
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 1.2
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 30 1.6
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.6
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.1
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.1
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 6.5
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 244 bits (596), Expect = 6e-65
Identities = 113/119 (94%), Positives = 116/119 (97%)
Frame = +3
Query: 210 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKY 389
HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KY
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKY 85
Query: 390 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXAGISKNGQTREHALLAFTLG 566
Y+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEF AGISKNGQTREHALLA TLG
Sbjct: 86 YITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLG 144
Score = 54.0 bits (124), Expect = 9e-08
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +2
Query: 134 MGKEKTHINIVVIGHVDSGKSTTTG 208
MGKEK HINIVVIGHVDSGKSTTTG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTG 25
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 244 bits (596), Expect = 6e-65
Identities = 113/119 (94%), Positives = 116/119 (97%)
Frame = +3
Query: 210 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKY 389
HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KY
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKY 85
Query: 390 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXAGISKNGQTREHALLAFTLG 566
Y+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEF AGISKNGQTREHALLA TLG
Sbjct: 86 YITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLG 144
Score = 54.0 bits (124), Expect = 9e-08
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +2
Query: 134 MGKEKTHINIVVIGHVDSGKSTTTG 208
MGKEK HINIVVIGHVDSGKSTTTG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTG 25
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +1
Query: 565 GVKQLIVGVNKMDSTEPPYSEPRF 636
GVKQLIV NKMDSTEPP+SE RF
Sbjct: 144 GVKQLIVACNKMDSTEPPFSEARF 167
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 244 bits (596), Expect = 6e-65
Identities = 113/119 (94%), Positives = 116/119 (97%)
Frame = +3
Query: 210 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKY 389
HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KY
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKY 85
Query: 390 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXAGISKNGQTREHALLAFTLG 566
Y+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEF AGISKNGQTREHALLA TLG
Sbjct: 86 YITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLG 144
Score = 54.0 bits (124), Expect = 9e-08
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +2
Query: 134 MGKEKTHINIVVIGHVDSGKSTTTG 208
MGKEK HINIVVIGHVDSGKSTTTG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTG 25
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +1
Query: 565 GVKQLIVGVNKMDSTEPPYSEPRF 636
GVKQLIV NKMDSTEPP+SE RF
Sbjct: 144 GVKQLIVACNKMDSTEPPFSEARF 167
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 196 bits (478), Expect = 1e-50
Identities = 89/92 (96%), Positives = 92/92 (100%)
Frame = +3
Query: 210 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKY 389
HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KY
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKY 85
Query: 390 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 485
Y+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 86 YITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 54.0 bits (124), Expect = 9e-08
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +2
Query: 134 MGKEKTHINIVVIGHVDSGKSTTTG 208
MGKEK HINIVVIGHVDSGKSTTTG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTG 25
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +1
Query: 577 LIVGVNKMDSTEPPYSEPRF 636
L+V NKMDSTEPP+SE RF
Sbjct: 114 LVVACNKMDSTEPPFSEARF 133
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 150 bits (364), Expect = 7e-37
Identities = 69/119 (57%), Positives = 86/119 (72%)
Frame = +3
Query: 210 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKY 389
HL++ +D RTI+KF+ EA GK SF YAWVLD+ + ERERG+T+DI FETS
Sbjct: 189 HLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHR 248
Query: 390 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXAGISKNGQTREHALLAFTLG 566
+ ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF G GQT+EHALL +LG
Sbjct: 249 RIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLG 307
Score = 33.9 bits (74), Expect = 0.099
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 143 EKTHINIVVIGHVDSGKSTTTG 208
+K IN++V+GHVD+GKST G
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMG 188
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1
Query: 565 GVKQLIVGVNKMDSTEPPYSEPRFE 639
GV QLIV VNK+D+ + +S+ RF+
Sbjct: 307 GVTQLIVAVNKLDTVD--WSQDRFD 329
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 150 bits (364), Expect = 7e-37
Identities = 69/119 (57%), Positives = 86/119 (72%)
Frame = +3
Query: 210 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKY 389
HL++ +D RTI+KF+ EA GK SF YAWVLD+ + ERERG+T+DI FETS
Sbjct: 207 HLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHR 266
Query: 390 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXAGISKNGQTREHALLAFTLG 566
+ ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF G GQT+EHALL +LG
Sbjct: 267 RIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLG 325
Score = 33.9 bits (74), Expect = 0.099
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 143 EKTHINIVVIGHVDSGKSTTTG 208
+K IN++V+GHVD+GKST G
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMG 206
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1
Query: 565 GVKQLIVGVNKMDSTEPPYSEPRFE 639
GV QLIV VNK+D+ + +S+ RF+
Sbjct: 325 GVTQLIVAVNKLDTVD--WSQDRFD 347
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 130 bits (315), Expect = 6e-31
Identities = 57/118 (48%), Positives = 83/118 (70%)
Frame = +3
Query: 213 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYY 392
L++ G +DKRT+EK+E+EA+E G+ S+ +W +D ERE+G T+++ FET K +
Sbjct: 129 LMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRH 188
Query: 393 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXAGISKNGQTREHALLAFTLG 566
TI+DAPGH+ F+ NMI G +QAD AVL+++A GEF G + GQTREH++L T G
Sbjct: 189 FTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSMLVKTAG 246
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 137 GKEKTHINIVVIGHVDSGKSTTTG 208
G K HIN+V +GHVD+GKST G
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGG 127
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 562 SGVKQLIVGVNKMDSTEPPYSEPRFE 639
+GVK L++ VNKMD + E RF+
Sbjct: 245 AGVKHLVILVNKMDDPTVKWEEERFK 270
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 89.0 bits (211), Expect = 2e-18
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = +3
Query: 210 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 335
HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK +
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKVTK 67
Score = 54.0 bits (124), Expect = 9e-08
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +2
Query: 134 MGKEKTHINIVVIGHVDSGKSTTTG 208
MGKEK HINIVVIGHVDSGKSTTTG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTG 25
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 71.7 bits (168), Expect = 4e-13
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = +3
Query: 312 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 491
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 492 TGEFXAGISKNGQTREHALLAFTLG 566
G QT+EH +LA +G
Sbjct: 143 DGVME-------QTKEHLILAKQVG 160
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 146 KTHINIVVIGHVDSGKSTTTGS 211
K ++N+ IGH+D GK+T T +
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSA 64
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 71.7 bits (168), Expect = 4e-13
Identities = 39/85 (45%), Positives = 52/85 (61%)
Frame = +3
Query: 312 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 491
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 492 TGEFXAGISKNGQTREHALLAFTLG 566
G QTREH LLA +G
Sbjct: 147 DGPMP-------QTREHLLLARQVG 164
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 140 KEKTHINIVVIGHVDSGKSTTTGS 211
++K H+N+ IGHVD GK+T T +
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSA 68
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 71.7 bits (168), Expect = 4e-13
Identities = 39/85 (45%), Positives = 52/85 (61%)
Frame = +3
Query: 312 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 491
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 492 TGEFXAGISKNGQTREHALLAFTLG 566
G QTREH LLA +G
Sbjct: 148 DGPMP-------QTREHLLLARQVG 165
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 140 KEKTHINIVVIGHVDSGKSTTTGS 211
++K H+N+ IGHVD GK+T T +
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSA 69
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 71.7 bits (168), Expect = 4e-13
Identities = 39/85 (45%), Positives = 52/85 (61%)
Frame = +3
Query: 312 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 491
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 492 TGEFXAGISKNGQTREHALLAFTLG 566
G QTREH LLA +G
Sbjct: 148 DGPMP-------QTREHLLLARQVG 165
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 140 KEKTHINIVVIGHVDSGKSTTTGS 211
++K H+N+ IGHVD GK+T T +
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSA 69
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 71.7 bits (168), Expect = 4e-13
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = +3
Query: 312 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 491
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 492 TGEFXAGISKNGQTREHALLAFTLG 566
G QT+EH +LA +G
Sbjct: 143 DGVME-------QTKEHLILAKQVG 160
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 146 KTHINIVVIGHVDSGKSTTTGS 211
K ++N+ IGH+D GK+T T +
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSA 64
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +3
Query: 309 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 488
+LDKL+ ERERGIT+ Y + +ID PGH DF + + D +L+VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 489 GTG 497
G
Sbjct: 136 NQG 138
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 309 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 488
V D L ERERGIT+ A + + + +ID PGH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 489 GTG 497
G
Sbjct: 124 SAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +3
Query: 312 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 491
+D + ER+RGITI A + + IID PGH DF + D AVL++ G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CG 145
Query: 492 TG 497
G
Sbjct: 146 VG 147
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 38.3 bits (85), Expect = 0.005
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 282 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 458
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 459 ADCAVLIVAAGTG 497
AD VL+VAA G
Sbjct: 228 ADIVVLVVAADDG 240
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 312 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 482
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 312 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 482
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 393 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXAGISKNGQTREHALLA 554
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLA 120
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 155 INIVVIGHVDSGKSTTT 205
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.23
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 315 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 479
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 480 VAAGTG 497
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.23
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 315 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 479
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 480 VAAGTG 497
V A G
Sbjct: 107 VDAHEG 112
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.92
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 390 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 485
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 348 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 497
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 134 MGKEKTHINIVVIGHVDSGKSTTTGS 211
M +++ N+ VI HVD GKST T S
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDS 38
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 348 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 497
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 134 MGKEKTHINIVVIGHVDSGKSTTTGS 211
M +++ N+ VI HVD GKST T S
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDS 38
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 399 IIDAPGHRDFIKNMITGTSQADCAVLIV 482
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 237 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 338
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 237 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 338
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 155 INIVVIGHVDSGKSTTT 205
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 393 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 488
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,311,073
Number of Sequences: 27780
Number of extensions: 287876
Number of successful extensions: 837
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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