Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_J21
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49909-8|CAA90111.1|  204|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z83228-8|CAE17820.2|  358|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z92784-5|CAB07196.3|  554|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z68219-3|CAA92480.2|  747|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z32679-9|CAA83593.3|  337|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z49909-8|CAA90111.1|  204|Caenorhabditis elegans Hypothetical
           protein C14A4.7a protein.
          Length = 204

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 80  EWIPKSPYIVYHSLASRYRSLY 145
           EW+ K+PY VYH LAS   S +
Sbjct: 115 EWMRKAPYSVYHCLASLLVSFF 136


>Z83228-8|CAE17820.2|  358|Caenorhabditis elegans Hypothetical
           protein F52F12.9 protein.
          Length = 358

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
 Frame = +3

Query: 42  HIMVSIVA-PKVSENGFRNLRTLYITRWPVDTG---PCIPNSHGFGTKYS 179
           H+M   ++  ++++  F+  RT     WPVD G   P  PN+  F T +S
Sbjct: 110 HLMKGFLSISRLAKPVFKTNRTANTAEWPVDVGYMDPLTPNAVEFTTLFS 159


>Z92784-5|CAB07196.3|  554|Caenorhabditis elegans Hypothetical
           protein F31C3.6a protein.
          Length = 554

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +2

Query: 50  GVDSSSKGLREWIPKSPYIVYHSLASRYRSLYSE 151
           G+ +SS+G  EW      I+Y +L +++RS+  E
Sbjct: 143 GIRTSSRGADEWNCSIKKIMYENLNTKWRSIAKE 176


>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical
           protein ZC84.1 protein.
          Length = 1556

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 649 PSDAFQITSLHEPLYILYTGNEIIR 575
           P D    TS+H P +++YTG E IR
Sbjct: 420 PYDIQPRTSIHHPGFMVYTGKESIR 444


>Z68219-3|CAA92480.2|  747|Caenorhabditis elegans Hypothetical
           protein T05A1.3 protein.
          Length = 747

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = +3

Query: 84  GFRNLRTLYITRWPVDTGPCIPNSHGFGTKYSLAVENVSL 203
           GFRNL  L + R  +DT P      G G  YSL V+N  +
Sbjct: 92  GFRNLDRLELDRCLIDTVP-EGLFAGLGQLYSLIVKNAKI 130


>Z32679-9|CAA83593.3|  337|Caenorhabditis elegans Hypothetical
           protein C05B5.5 protein.
          Length = 337

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 422 KNYYKEDKRIFFFRFLNIIVIINHNTTK 339
           KNYY+  +  F F F N + I N   +K
Sbjct: 111 KNYYENPEEAFLFAFRNALSIFNVQNSK 138


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,638,743
Number of Sequences: 27780
Number of extensions: 266741
Number of successful extensions: 583
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)