Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_J14
(605 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X75339-1|CAA53089.1| 177|Drosophila melanogaster ribosomal prot... 234 8e-62
AY071222-1|AAL48844.1| 177|Drosophila melanogaster RE26382p pro... 234 8e-62
AE013599-2503|AAF57838.1| 177|Drosophila melanogaster CG6510-PA... 234 8e-62
BT023059-1|AAY55475.1| 328|Drosophila melanogaster IP10969p pro... 31 1.6
AY129442-1|AAM76184.1| 1124|Drosophila melanogaster LD16566p pro... 29 4.9
AE014296-2184|AAF49884.1| 1087|Drosophila melanogaster CG10971-P... 29 4.9
AE014296-2183|AAF49885.2| 1124|Drosophila melanogaster CG10971-P... 29 4.9
BT022919-1|AAY55335.1| 376|Drosophila melanogaster IP11254p pro... 28 8.6
BT022400-1|AAY54816.1| 378|Drosophila melanogaster IP11554p pro... 28 8.6
BT022300-1|AAY54716.1| 378|Drosophila melanogaster IP11354p pro... 28 8.6
BT022248-1|AAY54664.1| 378|Drosophila melanogaster IP11454p pro... 28 8.6
AE014134-1298|AAF52530.1| 397|Drosophila melanogaster CG6717-PA... 28 8.6
>X75339-1|CAA53089.1| 177|Drosophila melanogaster ribosomal protein
L18a protein.
Length = 177
Score = 234 bits (572), Expect = 8e-62
Identities = 109/154 (70%), Positives = 120/154 (77%)
Frame = +2
Query: 92 PNLPXYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWL 271
P P YKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGEIV NFGIWL
Sbjct: 23 PQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIKNFGIWL 82
Query: 272 RYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQV 451
RY+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRARAHSIQIIKV+ I AA RR V
Sbjct: 83 RYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHV 142
Query: 452 KQFHNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 553
KQFH+S I+FPL +RVHH F++++P TYF
Sbjct: 143 KQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 25 MKAKGQLREYEVIGRK 72
M+AKG L+EYEV+GRK
Sbjct: 1 MRAKGLLKEYEVVGRK 16
>AY071222-1|AAL48844.1| 177|Drosophila melanogaster RE26382p
protein.
Length = 177
Score = 234 bits (572), Expect = 8e-62
Identities = 109/154 (70%), Positives = 120/154 (77%)
Frame = +2
Query: 92 PNLPXYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWL 271
P P YKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGEIV NFGIWL
Sbjct: 23 PQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIKNFGIWL 82
Query: 272 RYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQV 451
RY+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRARAHSIQIIKV+ I AA RR V
Sbjct: 83 RYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHV 142
Query: 452 KQFHNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 553
KQFH+S I+FPL +RVHH F++++P TYF
Sbjct: 143 KQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 25 MKAKGQLREYEVIGRK 72
M+AKG L+EYEV+GRK
Sbjct: 1 MRAKGLLKEYEVVGRK 16
>AE013599-2503|AAF57838.1| 177|Drosophila melanogaster CG6510-PA
protein.
Length = 177
Score = 234 bits (572), Expect = 8e-62
Identities = 109/154 (70%), Positives = 120/154 (77%)
Frame = +2
Query: 92 PNLPXYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWL 271
P P YKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGEIV NFGIWL
Sbjct: 23 PQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIKNFGIWL 82
Query: 272 RYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQV 451
RY+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRARAHSIQIIKV+ I AA RR V
Sbjct: 83 RYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHV 142
Query: 452 KQFHNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 553
KQFH+S I+FPL +RVHH F++++P TYF
Sbjct: 143 KQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 25 MKAKGQLREYEVIGRK 72
M+AKG L+EYEV+GRK
Sbjct: 1 MRAKGLLKEYEVVGRK 16
>BT023059-1|AAY55475.1| 328|Drosophila melanogaster IP10969p
protein.
Length = 328
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 25 MKAKGQLREYEVIGRK 72
M+AKG L+EYEV+GRK
Sbjct: 1 MRAKGLLKEYEVVGRK 16
>AY129442-1|AAM76184.1| 1124|Drosophila melanogaster LD16566p
protein.
Length = 1124
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 351 ATEIWELDTEPELIQYRLSKWK*SRLLRVAVHRSNSSTTAPSDSH 485
A W + + L+Q R + WK S LL + + S S SH
Sbjct: 45 AKTFWMIISRQPLMQSRFTAWKFSHLLHKVLREGHESAIRHSQSH 89
>AE014296-2184|AAF49884.1| 1087|Drosophila melanogaster CG10971-PB,
isoform B protein.
Length = 1087
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 351 ATEIWELDTEPELIQYRLSKWK*SRLLRVAVHRSNSSTTAPSDSH 485
A W + + L+Q R + WK S LL + + S S SH
Sbjct: 8 AKTFWMIISRQPLMQSRFTAWKFSHLLHKVLREGHESAIRHSQSH 52
>AE014296-2183|AAF49885.2| 1124|Drosophila melanogaster CG10971-PA,
isoform A protein.
Length = 1124
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 351 ATEIWELDTEPELIQYRLSKWK*SRLLRVAVHRSNSSTTAPSDSH 485
A W + + L+Q R + WK S LL + + S S SH
Sbjct: 45 AKTFWMIISRQPLMQSRFTAWKFSHLLHKVLREGHESAIRHSQSH 89
>BT022919-1|AAY55335.1| 376|Drosophila melanogaster IP11254p
protein.
Length = 376
Score = 28.3 bits (60), Expect = 8.6
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Frame = -3
Query: 288 ERDS*RSQIPKFLI-----LMGLFSGISLIETISPVVFLNFLSCLRKYQKRDLATIGSGE 124
E+ S ++PKF I L G+F + +++ P LN L L K D +
Sbjct: 258 EKKSVNVKLPKFKIESKAQLKGIFENLGILDVFKPSADLNGL-VLESGAKIDKIVQKAFL 316
Query: 123 KILILX---QGRFGLVLRRELTADNLIFPQLSFSLHFWSFYL 7
KI G++ RR+ + DNLI P + F FY+
Sbjct: 317 KIDEKGGEASAATGVLTRRKKSIDNLIQPPMEFIADHPFFYV 358
>BT022400-1|AAY54816.1| 378|Drosophila melanogaster IP11554p
protein.
Length = 378
Score = 28.3 bits (60), Expect = 8.6
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Frame = -3
Query: 288 ERDS*RSQIPKFLI-----LMGLFSGISLIETISPVVFLNFLSCLRKYQKRDLATIGSGE 124
E+ S ++PKF I L G+F + +++ P LN L L K D +
Sbjct: 260 EKKSVNVKLPKFKIESKAQLKGIFENLGILDVFKPSADLNGL-VLESGAKIDKIVQKAFL 318
Query: 123 KILILX---QGRFGLVLRRELTADNLIFPQLSFSLHFWSFYL 7
KI G++ RR+ + DNLI P + F FY+
Sbjct: 319 KIDEKGGEASAATGVLTRRKKSIDNLIQPPMEFIADHPFFYV 360
>BT022300-1|AAY54716.1| 378|Drosophila melanogaster IP11354p
protein.
Length = 378
Score = 28.3 bits (60), Expect = 8.6
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Frame = -3
Query: 288 ERDS*RSQIPKFLI-----LMGLFSGISLIETISPVVFLNFLSCLRKYQKRDLATIGSGE 124
E+ S ++PKF I L G+F + +++ P LN L L K D +
Sbjct: 260 EKKSVNVKLPKFKIESKAQLKGIFENLGILDVFKPSADLNGL-VLESGAKIDKIVQKAFL 318
Query: 123 KILILX---QGRFGLVLRRELTADNLIFPQLSFSLHFWSFYL 7
KI G++ RR+ + DNLI P + F FY+
Sbjct: 319 KIDEKGGEASAATGVLTRRKKSIDNLIQPPMEFIADHPFFYV 360
>BT022248-1|AAY54664.1| 378|Drosophila melanogaster IP11454p
protein.
Length = 378
Score = 28.3 bits (60), Expect = 8.6
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Frame = -3
Query: 288 ERDS*RSQIPKFLI-----LMGLFSGISLIETISPVVFLNFLSCLRKYQKRDLATIGSGE 124
E+ S ++PKF I L G+F + +++ P LN L L K D +
Sbjct: 260 EKKSVNVKLPKFKIESKAQLKGIFENLGILDVFKPSADLNGL-VLESGAKIDKIVQKAFL 318
Query: 123 KILILX---QGRFGLVLRRELTADNLIFPQLSFSLHFWSFYL 7
KI G++ RR+ + DNLI P + F FY+
Sbjct: 319 KIDEKGGEASAATGVLTRRKKSIDNLIQPPMEFIADHPFFYV 360
>AE014134-1298|AAF52530.1| 397|Drosophila melanogaster CG6717-PA
protein.
Length = 397
Score = 28.3 bits (60), Expect = 8.6
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Frame = -3
Query: 288 ERDS*RSQIPKFLI-----LMGLFSGISLIETISPVVFLNFLSCLRKYQKRDLATIGSGE 124
E+ S ++PKF I L G+F + +++ P LN L L K D +
Sbjct: 279 EKKSVNVKLPKFKIESKAQLKGIFENLGILDVFKPSADLNGL-VLESGAKIDKIVQKAFL 337
Query: 123 KILILX---QGRFGLVLRRELTADNLIFPQLSFSLHFWSFYL 7
KI G++ RR+ + DNLI P + F FY+
Sbjct: 338 KIDEKGGEASAATGVLTRRKKSIDNLIQPPMEFIADHPFFYV 379
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,230,796
Number of Sequences: 53049
Number of extensions: 566464
Number of successful extensions: 1774
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1774
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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