Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_J12
         (518 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC087079-7|AAK27870.1|  145|Caenorhabditis elegans Hypothetical ...    88   3e-18
AC087079-8|AAK27871.1|   88|Caenorhabditis elegans Hypothetical ...    54   5e-08
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z77655-1|CAB01137.1|  393|Caenorhabditis elegans Hypothetical pr...    28   3.5  
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical...    28   3.5  
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical...    28   3.5  
AF040642-10|AAB94949.2|  576|Caenorhabditis elegans Hypothetical...    28   3.5  
AF067219-10|AAC17031.1|  753|Caenorhabditis elegans Hypothetical...    28   4.6  
AF003133-2|AAB54136.1|  753|Caenorhabditis elegans Hypothetical ...    28   4.6  
Z78542-2|CAB01744.2|  641|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z75550-7|CAA99925.2|  195|Caenorhabditis elegans Hypothetical pr...    27   6.1  
U39472-5|AAK31393.1|  128|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>AC087079-7|AAK27870.1|  145|Caenorhabditis elegans Hypothetical
           protein Y37E3.8a protein.
          Length = 145

 Score = 88.2 bits (209), Expect = 3e-18
 Identities = 39/69 (56%), Positives = 45/69 (65%)
 Frame = +2

Query: 50  MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 229
           MA + +KTRKLRGHVS                 NAGG+HHHRIN DKYHPGYFGK+GMR 
Sbjct: 1   MAHALRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINRDKYHPGYFGKVGMRV 60

Query: 230 FHFSKEQEF 256
           FH +K Q +
Sbjct: 61  FHLNKNQHY 69



 Score = 54.4 bits (125), Expect = 5e-08
 Identities = 30/86 (34%), Positives = 43/86 (50%)
 Frame = +3

Query: 237 LVKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPV 416
           L KN+++CP +N+++LW+LV ++ R K   A  GK PVI+  K            P+ P+
Sbjct: 63  LNKNQHYCPTVNVERLWSLVPQEVRDK---ATGGKSPVIDCTKLGYFKVLGKGLLPETPL 119

Query: 417 IVXXXXXXXXXXXXXXDVGGACVLSA 494
           IV                GGACVL A
Sbjct: 120 IVKARFFSHEAEQKIKKAGGACVLVA 145


>AC087079-8|AAK27871.1|   88|Caenorhabditis elegans Hypothetical
           protein Y37E3.8b protein.
          Length = 88

 Score = 54.4 bits (125), Expect = 5e-08
 Identities = 30/86 (34%), Positives = 43/86 (50%)
 Frame = +3

Query: 237 LVKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPV 416
           L KN+++CP +N+++LW+LV ++ R K   A  GK PVI+  K            P+ P+
Sbjct: 6   LNKNQHYCPTVNVERLWSLVPQEVRDK---ATGGKSPVIDCTKLGYFKVLGKGLLPETPL 62

Query: 417 IVXXXXXXXXXXXXXXDVGGACVLSA 494
           IV                GGACVL A
Sbjct: 63  IVKARFFSHEAEQKIKKAGGACVLVA 88


>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical
           protein Y37A1B.17b protein.
          Length = 1467

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 365 SWILQVARQRQTPQTTCHSKSKVLLKISREENQGC 469
           SW+ +++   Q P+T C      ++K+ REE   C
Sbjct: 5   SWV-RISNATQDPETRCSVAQDQIVKVVREEGDWC 38


>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical
           protein Y37A1B.17a protein.
          Length = 1538

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 365 SWILQVARQRQTPQTTCHSKSKVLLKISREENQGC 469
           SW+ +++   Q P+T C      ++K+ REE   C
Sbjct: 5   SWV-RISNATQDPETRCSVAQDQIVKVVREEGDWC 38


>Z77655-1|CAB01137.1|  393|Caenorhabditis elegans Hypothetical
           protein C56A3.1 protein.
          Length = 393

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 156 PALPRPPGCLRCFPIRPCP 100
           PA P+ P C  C P +PCP
Sbjct: 50  PACPQAPSCPVCPPPQPCP 68


>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
           protein Y37A1B.17b protein.
          Length = 1467

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 365 SWILQVARQRQTPQTTCHSKSKVLLKISREENQGC 469
           SW+ +++   Q P+T C      ++K+ REE   C
Sbjct: 5   SWV-RISNATQDPETRCSVAQDQIVKVVREEGDWC 38


>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
           protein Y37A1B.17a protein.
          Length = 1538

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 365 SWILQVARQRQTPQTTCHSKSKVLLKISREENQGC 469
           SW+ +++   Q P+T C      ++K+ REE   C
Sbjct: 5   SWV-RISNATQDPETRCSVAQDQIVKVVREEGDWC 38


>AF040642-10|AAB94949.2|  576|Caenorhabditis elegans Hypothetical
           protein C50D2.1 protein.
          Length = 576

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +2

Query: 155 GGEHHHRINMDKYHPGYFGKLGMRNFHFSKEQEF 256
           G  HH +++   +  GY   LG+R+F +S+ QE+
Sbjct: 401 GNGHHGKVDFGTWGGGYSDNLGVRDF-WSQTQEY 433


>AF067219-10|AAC17031.1|  753|Caenorhabditis elegans Hypothetical
           protein R12E2.10 protein.
          Length = 753

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 311 AEVCICSRWQGPRHQYCQSWILQVARQRQ 397
           AE+ ICS  +GP ++Y     +Q  RQR+
Sbjct: 613 AEIAICSLLRGPTYKYPVQRAVQFLRQRR 641


>AF003133-2|AAB54136.1|  753|Caenorhabditis elegans Hypothetical
           protein T21E3.1 protein.
          Length = 753

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 311 AEVCICSRWQGPRHQYCQSWILQVARQRQ 397
           AE+ ICS  +GP ++Y     +Q  RQR+
Sbjct: 613 AEIAICSLLRGPTYKYPVQRAVQFLRQRR 641


>Z78542-2|CAB01744.2|  641|Caenorhabditis elegans Hypothetical
           protein F20D1.2 protein.
          Length = 641

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = -3

Query: 336 HLEQMHTSASSVQRLMSKAYLSSKLDRNSCSLLKWKFLIPSLPKYPGWYLSMLIL 172
           HLE +H S S   +       SS +   SC  L WK  I     +  ++L+++ L
Sbjct: 169 HLESLHCSPSMYTKNWFATLFSSSMSTESCHEL-WKLYIEQGDPFLVFHLAIVFL 222


>Z75550-7|CAA99925.2|  195|Caenorhabditis elegans Hypothetical
           protein T22C1.9 protein.
          Length = 195

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 5/69 (7%)
 Frame = +2

Query: 53  ATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMD-----KYHPGYFGKL 217
           +T  KK+ K  GH                   N GG   H + M+     ++ P  F KL
Sbjct: 127 STKSKKSEKDVGHDDHKKEDVHGDQKDDNKDRNDGGRDSHVVQMEHNSEEEHEPSGFKKL 186

Query: 218 GMRNFHFSK 244
           G   F+F K
Sbjct: 187 GKSFFNFKK 195


>U39472-5|AAK31393.1|  128|Caenorhabditis elegans Hypothetical
           protein B0304.4 protein.
          Length = 128

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = -1

Query: 368 SFDNIDDGDLA-IWSRCILQPRLF 300
           S  N+  G L  IWSRCI QP  F
Sbjct: 14  SSGNVQKGKLLNIWSRCIAQPSSF 37


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,219,734
Number of Sequences: 27780
Number of extensions: 230534
Number of successful extensions: 621
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)