Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_J02
(548 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical... 134 4e-32
AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and... 134 4e-32
Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical pr... 30 0.95
Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z70309-13|CAL36512.2| 383|Caenorhabditis elegans Hypothetical p... 29 2.9
Z70309-12|CAB54293.3| 413|Caenorhabditis elegans Hypothetical p... 29 2.9
Z70309-11|CAB54291.3| 408|Caenorhabditis elegans Hypothetical p... 29 2.9
U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z35604-6|CAA84681.1| 305|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z70287-3|CAA94300.1| 1459|Caenorhabditis elegans Hypothetical pr... 27 6.7
U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z81536-7|CAB04367.1| 338|Caenorhabditis elegans Hypothetical pr... 27 8.9
U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical p... 27 8.9
>AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical
protein Y56A3A.13 protein.
Length = 440
Score = 134 bits (324), Expect = 4e-32
Identities = 60/105 (57%), Positives = 79/105 (75%), Gaps = 1/105 (0%)
Frame = +2
Query: 191 ADILTFPSAFTQATGEAHWHILLRSRAIENQCYVVAAAQSGVHNPKRRSYGHALCVDPWG 370
A +L+FPSAFT TG AHW LLR+RAIENQCYVVAAAQ+G HNPKR+SYGH++ VDPWG
Sbjct: 186 AQLLSFPSAFTLNTGLAHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMVVDPWG 245
Query: 371 EVLADCGESAP-CYKIVEISHDKLNDVRRNMPVFQHXRPDVYSLY 502
V+A C E C+ +++S+ ++ +R PVF H R D+Y+L+
Sbjct: 246 AVVAQCSERVDMCFAEIDLSY--VDTLREMQPVFSHRRSDLYTLH 288
Score = 60.9 bits (141), Expect = 6e-10
Identities = 23/37 (62%), Positives = 32/37 (86%)
Frame = +1
Query: 49 VRLKESDFSNAGDHIVAPVDTPVGKIGMAICYDMRFP 159
VRL ES+FS AG ++ PVDTP+G++G++ICYD+RFP
Sbjct: 139 VRLMESEFSKAGTEMIPPVDTPIGRLGLSICYDVRFP 175
Score = 31.1 bits (67), Expect = 0.55
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3
Query: 9 KLHLFDVEIPGEKR*IEGE 65
KLHLFD+EIPG+ R +E E
Sbjct: 127 KLHLFDLEIPGKVRLMESE 145
>AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and
fragile histidinetriad fusion protein NitFhit protein.
Length = 440
Score = 134 bits (324), Expect = 4e-32
Identities = 60/105 (57%), Positives = 79/105 (75%), Gaps = 1/105 (0%)
Frame = +2
Query: 191 ADILTFPSAFTQATGEAHWHILLRSRAIENQCYVVAAAQSGVHNPKRRSYGHALCVDPWG 370
A +L+FPSAFT TG AHW LLR+RAIENQCYVVAAAQ+G HNPKR+SYGH++ VDPWG
Sbjct: 186 AQLLSFPSAFTLNTGLAHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMVVDPWG 245
Query: 371 EVLADCGESAP-CYKIVEISHDKLNDVRRNMPVFQHXRPDVYSLY 502
V+A C E C+ +++S+ ++ +R PVF H R D+Y+L+
Sbjct: 246 AVVAQCSERVDMCFAEIDLSY--VDTLREMQPVFSHRRSDLYTLH 288
Score = 60.9 bits (141), Expect = 6e-10
Identities = 23/37 (62%), Positives = 32/37 (86%)
Frame = +1
Query: 49 VRLKESDFSNAGDHIVAPVDTPVGKIGMAICYDMRFP 159
VRL ES+FS AG ++ PVDTP+G++G++ICYD+RFP
Sbjct: 139 VRLMESEFSKAGTEMIPPVDTPIGRLGLSICYDVRFP 175
Score = 31.1 bits (67), Expect = 0.55
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3
Query: 9 KLHLFDVEIPGEKR*IEGE 65
KLHLFD+EIPG+ R +E E
Sbjct: 127 KLHLFDLEIPGKVRLMESE 145
>Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical protein
F54D1.6 protein.
Length = 1423
Score = 30.3 bits (65), Expect = 0.95
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 338 YGHALCVDPWGEVLADCGESAPC 406
YG C D ++ DCG+S PC
Sbjct: 1178 YGQTQCPDNPSSIIQDCGDSVPC 1200
>Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical
protein C04G2.8 protein.
Length = 197
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 449 SHHSVCHEISQRFYSRGRTPRSRPGLRPTGRHRARARTNASSGCERRT 306
S SV S R GRT RSR R R R+R+R+ + S R+
Sbjct: 99 SRGSVSRRSSSRGSVYGRTGRSRSSKRSRSRSRSRSRSRSRSYSRSRS 146
>Z70309-13|CAL36512.2| 383|Caenorhabditis elegans Hypothetical
protein R102.4c protein.
Length = 383
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 188 SADILTFPSAFTQATGEAHWHILLRSRAI 274
S D+L PSA+TQ + + H I LRS +
Sbjct: 16 STDLLDTPSAYTQKSNKTHTSIDLRSDTV 44
>Z70309-12|CAB54293.3| 413|Caenorhabditis elegans Hypothetical
protein R102.4b protein.
Length = 413
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 188 SADILTFPSAFTQATGEAHWHILLRSRAI 274
S D+L PSA+TQ + + H I LRS +
Sbjct: 46 STDLLDTPSAYTQKSNKTHTSIDLRSDTV 74
>Z70309-11|CAB54291.3| 408|Caenorhabditis elegans Hypothetical
protein R102.4a protein.
Length = 408
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 188 SADILTFPSAFTQATGEAHWHILLRSRAI 274
S D+L PSA+TQ + + H I LRS +
Sbjct: 41 STDLLDTPSAYTQKSNKTHTSIDLRSDTV 69
>U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical
protein C10G11.9 protein.
Length = 203
Score = 28.3 bits (60), Expect = 3.9
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = -1
Query: 452 VSHHSVCHEISQRFYSRGRTPRSRPGLRPTGRHRARARTNASSGCERRT 306
VS S S R GRT RSR R R R R R+ + S R+
Sbjct: 104 VSRGSKSRRSSSRGSVYGRTGRSRSSKRSRSRSRPRTRSGSRSSSRSRS 152
>Z35604-6|CAA84681.1| 305|Caenorhabditis elegans Hypothetical
protein ZK1058.6 protein.
Length = 305
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +1
Query: 82 GDHIVAPV-DTPVGKIGMAICYDMRFP 159
GD PV T VGKIG AIC++ P
Sbjct: 142 GDGSTMPVFSTSVGKIGSAICWENYMP 168
>Z70287-3|CAA94300.1| 1459|Caenorhabditis elegans Hypothetical protein
R09E10.5 protein.
Length = 1459
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 335 SYGHALCVDPWGEVLADCGESAPC 406
SYG C D G+VL +CG+S C
Sbjct: 1209 SYG-LQCPDDPGQVLTECGDSVAC 1231
>U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical
protein T27A3.4 protein.
Length = 203
Score = 27.5 bits (58), Expect = 6.7
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = -1
Query: 452 VSHHSVCHEISQRFYSRGRTPRSRPGLRPTGRHRARARTNASSGCERRT 306
VS S S R GRT RSR R R R R R+ + S R+
Sbjct: 104 VSRGSKGRRSSSRGSVYGRTGRSRSSKRSRSRSRPRTRSGSRSSSRSRS 152
>Z81536-7|CAB04367.1| 338|Caenorhabditis elegans Hypothetical
protein F40D4.9a protein.
Length = 338
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -3
Query: 198 MSALIILRDVLSXREAHIITYSHTNFPYRSIDWCHNMVASIREVTLLQSNVSL 40
+S+L+ L ++S R+ + + N P R I W +V + +TL S ++L
Sbjct: 211 LSSLLYLPIMISVRKLSHLASAEQNHPQRYIFWQTMVVLIFKSLTLPASAIAL 263
>U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical
protein F13H8.7 protein.
Length = 387
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 191 ADILTFPSAFTQATGEAHWHILLRSRAIENQCYVVAAAQSG 313
A+I+ PSA A E W I R+ AI N + V + G
Sbjct: 252 AEIIFNPSATVGALSEPLWGIEARNAAIANHVFTVGINRVG 292
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,418,406
Number of Sequences: 27780
Number of extensions: 255844
Number of successful extensions: 790
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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