Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_I23
         (536 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0492 - 29476883-29476949,29477030-29477166,29477292-294773...    30   1.0  
12_02_1058 - 25735902-25736000,25736085-25736152,25736575-257366...    29   3.1  
05_03_0644 + 16527364-16527961,16528048-16528622,16528710-16528877     28   4.1  
11_06_0614 - 25530782-25531018,25532053-25532235                       28   5.4  
07_03_0448 - 18306583-18306654,18307132-18307222,18307679-183077...    28   5.4  
06_01_0372 + 2684208-2684390,2684867-2684968,2685197-2685290,268...    27   9.5  
03_05_1064 - 30058253-30058467,30058549-30058762,30058846-300589...    27   9.5  

>02_05_0492 -
           29476883-29476949,29477030-29477166,29477292-29477383,
           29477490-29477587,29477677-29477804,29477883-29478026,
           29478108-29478397,29478553-29478739,29479085-29479210,
           29480488-29480538,29480952-29481002,29482639-29484054
          Length = 928

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = -2

Query: 295 SPFDSNIPVLGFVGSNLMLENLVYGGMFGISTTAIAKTAMYNANFSSLFINPVISPIMYF 116
           SP+  N+ V+  +G N + E + +  +  + T  +   A + + FSSL  NP  SP+  F
Sbjct: 105 SPYSWNL-VVDLLGKNRLFEPM-WDTVSSMRTQGLLSLATFASVFSSLAANPASSPLRAF 162


>12_02_1058 -
           25735902-25736000,25736085-25736152,25736575-25736638,
           25736838-25736919,25737503-25737561,25737664-25737723,
           25737884-25738046,25738236-25738360,25738827-25738859,
           25739098-25739160,25739364-25739423,25739972-25740196,
           25740272-25740433
          Length = 420

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = +3

Query: 222 PYTKFSSIKLEPTKPRTGILESNGLLNNAEQLYKGKLLGPEAFQ 353
           P  + S   +E +     IL+++      E++Y+G+L+GP  F+
Sbjct: 241 PQWRASGYDVESSASSDAILKASAAREAIEKVYQGQLVGPSTFE 284


>05_03_0644 + 16527364-16527961,16528048-16528622,16528710-16528877
          Length = 446

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = -3

Query: 357 KFGMLLVPAISLYIVVQHYLEAHSIPI 277
           K G+LL P+++ Y++ Q +L+  S+PI
Sbjct: 311 KIGLLL-PSVNFYLIAQRFLKELSLPI 336


>11_06_0614 - 25530782-25531018,25532053-25532235
          Length = 139

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 68  PNQSPEVFLRQKSLNSEVHDGANNRINKKAAK 163
           PN + ++   +K LN+ VH+G + R NKK  K
Sbjct: 16  PN-ADDILDLEKGLNAHVHEGTSMRKNKKKKK 46


>07_03_0448 -
           18306583-18306654,18307132-18307222,18307679-18307752,
           18308440-18308557,18308785-18308888,18309463-18309572,
           18309995-18310115
          Length = 229

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 380 FSHRRNCETHSWRSCYFCNQI 442
           FSH    E HSWRSC   ++I
Sbjct: 86  FSHEPGEELHSWRSCIVPDEI 106


>06_01_0372 +
           2684208-2684390,2684867-2684968,2685197-2685290,
           2685450-2685532,2685684-2685773,2686931-2687173
          Length = 264

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 207 IPNIPPYTKFSSIKLEPTKPRTGIL 281
           IP+I  +   SS K  PTKP T +L
Sbjct: 232 IPDITEHASLSSHKTTPTKPMTNML 256


>03_05_1064 -
           30058253-30058467,30058549-30058762,30058846-30058936,
           30059361-30059617,30059702-30059902,30059975-30060065,
           30060510-30060573,30060754-30061021,30061118-30061249
          Length = 510

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -2

Query: 358 KVWNASGPSNFPLYSCSALFRSPFDSNIPVLGFVG 254
           K+ NAS  S     SC+  F  PF S +P +G  G
Sbjct: 94  KLENASEDSLLGQASCTTTFAVPFSSAMPAMGSDG 128


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,003,244
Number of Sequences: 37544
Number of extensions: 249625
Number of successful extensions: 535
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)