Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_I23
         (536 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83110-5|CAB05527.1|  387|Caenorhabditis elegans Hypothetical pr...    35   0.032
Z68752-4|CAA92983.1|  447|Caenorhabditis elegans Hypothetical pr...    29   1.6  
Z49968-11|CAN86616.1|  492|Caenorhabditis elegans Hypothetical p...    29   2.1  
Z49968-10|CAB54270.3|  490|Caenorhabditis elegans Hypothetical p...    29   2.1  
Z49968-9|CAB54271.3|  492|Caenorhabditis elegans Hypothetical pr...    29   2.1  
U64857-7|AAC25861.2|  373|Caenorhabditis elegans Groundhog (hedg...    29   2.1  
Z48585-4|CAA88480.1|  476|Caenorhabditis elegans Hypothetical pr...    28   3.7  
Z81088-11|CAB03132.1|  339|Caenorhabditis elegans Hypothetical p...    28   4.9  
U80031-1|AAB37611.1|  392|Caenorhabditis elegans Downstream of d...    27   6.5  
AC024831-12|AAW57824.1|  356|Caenorhabditis elegans Serpentine r...    27   8.6  
AC024831-8|AAK72079.3|  362|Caenorhabditis elegans Serpentine re...    27   8.6  

>Z83110-5|CAB05527.1|  387|Caenorhabditis elegans Hypothetical
           protein F57C2.5 protein.
          Length = 387

 Score = 35.1 bits (77), Expect = 0.032
 Identities = 17/63 (26%), Positives = 30/63 (47%)
 Frame = +3

Query: 228 TKFSSIKLEPTKPRTGILESNGLLNNAEQLYKGKLLGPEAFQTFNGELYTSLATGEIVKL 407
           T     + +P     G L  N  L  AE +  GK++GPE+    +  +Y S+   +++K+
Sbjct: 29  TSARKYRFDPPPALVGNLFINAGLEKAEHILDGKIVGPESMVVDDEAIYVSVNDAKVLKI 88

Query: 408 TAG 416
             G
Sbjct: 89  VDG 91


>Z68752-4|CAA92983.1|  447|Caenorhabditis elegans Hypothetical
           protein T12G3.4 protein.
          Length = 447

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +3

Query: 264 PRTGILESNGLLNNAEQLYKGKLLGPEA--FQTFNGELYTSLATGEIVKL 407
           P  G+L  N  L +AE L   ++ GPE+      N +LY    TG I ++
Sbjct: 87  PLEGVLAVNKRLTDAELLLVDQVYGPESLVLDEKNSKLYAGFKTGIIAEI 136


>Z49968-11|CAN86616.1|  492|Caenorhabditis elegans Hypothetical
           protein M110.5d protein.
          Length = 492

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
 Frame = +3

Query: 210 PNIPPYTKFSSIKLEPTKPRTGILESNGLLNNAEQLYKGKLLGPEAFQTFNGELY--TSL 383
           PN PP  K     L+ TK  +          N    YKGKL+G +      G+     ++
Sbjct: 19  PN-PPSPKSRLAMLKRTKKASNASSDPFRFQNNGISYKGKLIGEQDVDKARGDAMCAEAM 77

Query: 384 ATGEIVKLTAGGHVTFVT 437
            T + +   AG H T +T
Sbjct: 78  RTAKSIIKAAGAHKTRIT 95


>Z49968-10|CAB54270.3|  490|Caenorhabditis elegans Hypothetical
           protein M110.5a protein.
          Length = 490

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
 Frame = +3

Query: 210 PNIPPYTKFSSIKLEPTKPRTGILESNGLLNNAEQLYKGKLLGPEAFQTFNGELY--TSL 383
           PN PP  K     L+ TK  +          N    YKGKL+G +      G+     ++
Sbjct: 19  PN-PPSPKSRLAMLKRTKKASNASSDPFRFQNNGISYKGKLIGEQDVDKARGDAMCAEAM 77

Query: 384 ATGEIVKLTAGGHVTFVT 437
            T + +   AG H T +T
Sbjct: 78  RTAKSIIKAAGAHKTRIT 95


>Z49968-9|CAB54271.3|  492|Caenorhabditis elegans Hypothetical
           protein M110.5b protein.
          Length = 492

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
 Frame = +3

Query: 210 PNIPPYTKFSSIKLEPTKPRTGILESNGLLNNAEQLYKGKLLGPEAFQTFNGELY--TSL 383
           PN PP  K     L+ TK  +          N    YKGKL+G +      G+     ++
Sbjct: 19  PN-PPSPKSRLAMLKRTKKASNASSDPFRFQNNGISYKGKLIGEQDVDKARGDAMCAEAM 77

Query: 384 ATGEIVKLTAGGHVTFVT 437
            T + +   AG H T +T
Sbjct: 78  RTAKSIIKAAGAHKTRIT 95


>U64857-7|AAC25861.2|  373|Caenorhabditis elegans Groundhog
           (hedgehog-like family)protein 8 protein.
          Length = 373

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
 Frame = +3

Query: 201 VLIPNIPPY--TKFSSIKLEPTKPRTGILESN--GLLNNAEQLYKGKLLGPEAFQTFNGE 368
           V+ P   PY  T  +S+    T    G+ + N  G+  N    Y    L PEA +   G 
Sbjct: 120 VVEPPAMPYEMTTIASVGPLTTPASVGLKKGNIGGIAQNLNDRYTS--LTPEAQRAQKGH 177

Query: 369 LYTSLATGEIVKLTAGG 419
            YT+L  G+  +   GG
Sbjct: 178 TYTALGGGQFYQSLLGG 194


>Z48585-4|CAA88480.1|  476|Caenorhabditis elegans Hypothetical
           protein ZK673.4 protein.
          Length = 476

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +2

Query: 155 AAKVGIIHCSLCNSCGANPEHSSIY*ILKHQIRTH 259
           A + G   C +CN  G   +  S Y  +KH  R H
Sbjct: 25  AIEEGRFRCKICNYIGKRGQQGSTYPQIKHMKRLH 59


>Z81088-11|CAB03132.1|  339|Caenorhabditis elegans Hypothetical
           protein F53F1.11 protein.
          Length = 339

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = +3

Query: 138 TGLIKRLLKLALYIAVFAIAVVLIPNIPPY 227
           TG++  ++ L  ++AV+A+A + +P  P Y
Sbjct: 172 TGVLTGVIDLTNFVAVYAVAHICLPFFPVY 201


>U80031-1|AAB37611.1|  392|Caenorhabditis elegans Downstream of
           daf-16 (regulatedby daf-16) protein 20 protein.
          Length = 392

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -2

Query: 223 GGMFGISTTAIAKTAMYNANFSSLFINPVISPIMYFRVETFLSQKHL 83
           G +FG  T+   +TA  ++    LF++  IS  MY+  +     KHL
Sbjct: 347 GTLFGSPTSGPIQTATQSSGVVQLFVSMAIS-TMYWLSQLHFKMKHL 392


>AC024831-12|AAW57824.1|  356|Caenorhabditis elegans Serpentine
           receptor, class t protein23 protein.
          Length = 356

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = -2

Query: 262 FVGSNLMLENLVYGGMFGISTTAIAKTAMYNANFSSLFINPVI 134
           F+G  + L  +    +F I +    K  ++N+N+ S F NP++
Sbjct: 154 FIGRKIFL-TIAVPILFTIYSIFFTKPVIFNSNYMSWFFNPML 195


>AC024831-8|AAK72079.3|  362|Caenorhabditis elegans Serpentine
           receptor, class t protein24 protein.
          Length = 362

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -2

Query: 262 FVGSNLMLENLVYGGMFGISTTAIAKTAMYNANFSSLFINPVI 134
           F+G    L  L    ++ I      KTA +N+N+ S F NP++
Sbjct: 159 FIGKKFYL-TLSVPIIYTIYAIFFTKTASFNSNYISWFFNPLL 200


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,522,945
Number of Sequences: 27780
Number of extensions: 232933
Number of successful extensions: 557
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)