Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_I22
(648 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0105 - 20861130-20861384,20861472-20862262,20862364-208626... 32 0.45
03_01_0307 + 2414709-2414762,2415769-2415841,2416090-2416154,241... 30 1.4
02_04_0605 - 24290777-24290830,24290914-24291075,24291494-242916... 30 1.8
03_05_0625 - 26225201-26225879,26226706-26227553 29 2.4
08_02_1337 - 26238506-26238737,26239728-26240703,26241266-26242802 29 4.2
08_02_1465 - 27319377-27319405,27319936-27320101,27320336-273204... 28 5.6
01_06_1760 - 39697079-39697162,39697280-39697340,39697415-396974... 28 5.6
06_03_0588 + 22567820-22570802,22570917-22571269 28 7.4
05_05_0226 + 23442971-23443857,23444209-23446324 28 7.4
10_08_0959 - 21813756-21814097,21814462-21814570,21814688-218147... 27 9.7
10_08_0850 + 21050164-21050189,21050874-21050979,21051186-210512... 27 9.7
07_03_0149 - 14452654-14452666,14452943-14454699,14454886-144549... 27 9.7
06_01_1132 + 9346372-9346429,9347314-9348179,9348817-9349176 27 9.7
05_06_0243 - 26639497-26641173 27 9.7
>03_05_0105 -
20861130-20861384,20861472-20862262,20862364-20862618,
20862713-20862827,20862959-20863011,20863113-20863373,
20863699-20863749,20863863-20864114,20864504-20864726,
20865317-20865460
Length = 799
Score = 31.9 bits (69), Expect = 0.45
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Frame = -1
Query: 579 ITHLQTLIVF-RVKDFEIDSVRFPRGHKLPTVLMVVLVAICVSITI---LV*ILAQSHVQ 412
++HLQ+L F RVK S RFP +P V ++ VA CV +T+ I+ ++H
Sbjct: 396 VSHLQSLSCFPRVKILH-TSKRFPGQLYIPGVNFLLCVAACV-VTVSFKTTVIIGKAHEI 453
Query: 411 IVMLVNNFTVLLI 373
V+LV T LL+
Sbjct: 454 CVILVMIITTLLM 466
>03_01_0307 +
2414709-2414762,2415769-2415841,2416090-2416154,
2416288-2416365,2416880-2416999,2418021-2418091,
2418808-2418900,2419242-2419311,2420236-2420436,
2421345-2421557,2422354-2422440,2422441-2422652,
2422901-2423042,2423424-2423592,2424050-2424126,
2424393-2424563,2425095-2425171,2425299-2425401,
2426066-2426185,2426301-2426444,2426826-2426975,
2427398-2427541,2427816-2427903,2428672-2428799,
2429329-2429533,2429843-2430015,2430174-2430392,
2430490-2430684
Length = 1213
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = -1
Query: 570 LQTLIVFRVKDFEID-SVRFPRGHKLPTVLMVVLV 469
LQ LIVF V+ E+D ++ FP H L VL V++V
Sbjct: 215 LQVLIVFCVESLELDFALLFPERHTLLRVLPVLVV 249
>02_04_0605 -
24290777-24290830,24290914-24291075,24291494-24291694,
24291777-24291961,24292117-24292246
Length = 243
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -1
Query: 585 HRITHLQTLIVFRVKDFEIDSVRFPRGHKLPTVLMVVLVAICVSITILV 439
++I L + V + + D VR+ R KL VL++V VA+C + V
Sbjct: 104 YQIAKLCIIPVLCILEILFDKVRYSRNTKLSIVLVLVGVAVCTVTDVSV 152
>03_05_0625 - 26225201-26225879,26226706-26227553
Length = 508
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Frame = +1
Query: 307 WTTGHQNIVQSCFPLEFR----LILD-DKKDCKIINKHDDLYMTLSKDLDQNGDRDAYGD 471
W H+N + S FP + R L+ D DKKD K D + D + D D G+
Sbjct: 341 WVPKHENNLDSVFPRQTRRRWMLLQDLDKKDSTTFRKEHDEEIDFEWSSDGDDDSDHRGN 400
Query: 472 EDDHK 486
+++
Sbjct: 401 VPEYR 405
>08_02_1337 - 26238506-26238737,26239728-26240703,26241266-26242802
Length = 914
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 85 VIIATFFNMSVEASDSGKSDRKLYNSVISADYDDATKRCEQLQSEPNGS 231
++ +T N +V + +SDRK +S+D + C S+P+GS
Sbjct: 643 MMASTNVNRTVYGDQAEQSDRKTCQRELSSDLIRLSVECSSSSSQPHGS 691
>08_02_1465 -
27319377-27319405,27319936-27320101,27320336-27320444,
27320865-27321448
Length = 295
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 400 KHDDLYMTLSKDLDQNGDRDAYGDEDDHKNS 492
KH DLY+ S+ RD+Y D+DDH S
Sbjct: 219 KHPDLYLGKSEK-----GRDSYDDDDDHHES 244
>01_06_1760 -
39697079-39697162,39697280-39697340,39697415-39697479,
39697579-39697860,39697938-39698012,39698121-39698195,
39698343-39698399,39698653-39698726,39698912-39699055,
39699608-39699662,39700027-39700149,39700276-39700320,
39701068-39701160,39701249-39701662
Length = 548
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 217 EPNGSYIIKNTVTELLNN--AESNTINFSYKLWTTGHQNIVQSCFPLEFRLILDDKKDCK 390
+ + +KN +T+ + A I +++L T +E I++D +
Sbjct: 471 DAESEHYVKNVITKFSTDPKARRTVIIIAHRLSTI---QAADRIIVMENGNIVEDGNHSE 527
Query: 391 IINKHDDLYMTLSK 432
+INKHD LY L++
Sbjct: 528 LINKHDGLYSRLAR 541
>06_03_0588 + 22567820-22570802,22570917-22571269
Length = 1111
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -1
Query: 507 GHKLPTVLMVVLVAICVSITILV*ILAQSHVQIVMLVNN 391
GH LP + ++L+ S +I V +L SH+Q + L NN
Sbjct: 362 GHMLPNIQELILLNNKFSGSIPVSLLNASHLQKLSLANN 400
>05_05_0226 + 23442971-23443857,23444209-23446324
Length = 1000
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = -1
Query: 600 TLIVLHRITHLQTLIVFRVKDFEIDSVRFPRGHKLPTVLMVVLVAI 463
TLI L+R+ +L+ L+ +++++FEI FP +L V+ V A+
Sbjct: 829 TLINLNRLLYLK-LVAYKLENFEIKHGAFPSLRRLCFVVKSVTSAL 873
>10_08_0959 -
21813756-21814097,21814462-21814570,21814688-21814740,
21814849-21815049,21815320-21815433,21815513-21815671,
21816490-21816849,21816928-21817149,21817967-21818093,
21818887-21819023,21819169-21819292,21819665-21820174,
21820255-21820436,21820812-21820862,21821114-21821266,
21821339-21821437,21821519-21821861,21821957-21822030,
21822105-21823025,21823133-21823257,21823419-21823461,
21823574-21823762,21824814-21825074,21825228-21825387,
21826200-21826363,21826523-21827009,21827090-21827431,
21827519-21827836,21828001-21828041,21828136-21828388,
21829158-21829261,21830198-21830386,21830543-21831196,
21831320-21831610,21831739-21831882,21832107-21832205,
21832549-21832657,21832739-21832923,21833008-21833121,
21833270-21833401,21833483-21833815,21833945-21834436,
21834773-21834847,21834917-21835066,21835143-21835241,
21835463-21835547,21837188-21837375,21837513-21837647,
21837729-21837849,21838127-21838194,21838275-21838370,
21838450-21838554,21838665-21838980,21839053-21839142,
21840011-21840181,21840850-21841010,21841088-21841270,
21841839-21841940,21842515-21842632,21842704-21842798,
21842972-21843022,21843107-21843241,21843333-21843436,
21844249-21844414,21844649-21844773,21845220-21845316
Length = 4181
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Frame = +1
Query: 358 RLILDDKKDCKIINKHDDLYMTLS------KDLDQNGDRDAYGDEDDHKNSWKF 501
RL++DD +D K +++ D+ + L K ++Q+ + Y ++ ++ W F
Sbjct: 478 RLVVDDNEDIKKLDRELDIEVILQWRMLAHKFVEQSAETHQYAQQNKQQSWWSF 531
>10_08_0850 +
21050164-21050189,21050874-21050979,21051186-21051257,
21051775-21051828,21052077-21052184,21052653-21052802,
21052914-21053258,21053361-21054801,21054844-21055675,
21057060-21057325,21057530-21059603,21060172-21060442,
21060556-21060990
Length = 2059
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 71 NNPXRL*LRHFSICLLKQVILANPTENYTIQSFPLTTMMQP 193
NNP R + + LL+ +ILA P ++ FPL +++ P
Sbjct: 339 NNPKRSSITSALVELLQYLILAVPDTFVSLDCFPLPSVVAP 379
>07_03_0149 -
14452654-14452666,14452943-14454699,14454886-14454990,
14455808-14455978,14456309-14456641,14456900-14457492,
14458864-14458906
Length = 1004
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 163 VISADYDDATKRCEQLQSEPN 225
V+ +D +D +RCEQL SE N
Sbjct: 111 VLDSDDEDEAERCEQLASENN 131
>06_01_1132 + 9346372-9346429,9347314-9348179,9348817-9349176
Length = 427
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 409 DLYMTLSKDLDQNGDRDAYGDEDDHKNSWKFMSSWESNRVYF 534
D ++ LSKD D N + + D D++ N+ S+ +N +YF
Sbjct: 173 DSWLLLSKDSDNNNNNNNNNDNDNNDNN---NSNSSNNGMYF 211
>05_06_0243 - 26639497-26641173
Length = 558
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 151 LYNSVISADYDDATKRCEQLQ 213
L NSV A Y+D K C QLQ
Sbjct: 272 LRNSVAKASYEDVFKSCPQLQ 292
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,312,288
Number of Sequences: 37544
Number of extensions: 299691
Number of successful extensions: 747
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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