Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_I18
(348 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26876-1|CAA81488.1| 70|Homo sapiens ribosomal protein protein. 54 2e-07
BC000603-1|AAH00603.1| 70|Homo sapiens ribosomal protein L38 p... 54 2e-07
AB007185-1|BAA25844.1| 37|Homo sapiens ribosomal protein L38 p... 48 6e-06
BC014655-1|AAH14655.1| 173|Homo sapiens chromosome 19 open read... 29 5.3
BC010129-1|AAH10129.1| 173|Homo sapiens chromosome 19 open read... 29 5.3
BC003639-1|AAH03639.2| 168|Homo sapiens C19orf10 protein protein. 29 5.3
AL365374-1|CAB96948.1| 170|Homo sapiens R33729_1 hypothetical p... 29 5.3
AL365373-1|CAB96947.1| 170|Homo sapiens R33729_1 hypothetical p... 29 5.3
AC005594-1|AAC33800.1| 152|Homo sapiens R33729_1, partial CDS p... 29 5.3
AC005339-1|AAC27824.1| 99|Homo sapiens R33729_1 protein. 29 5.3
>Z26876-1|CAA81488.1| 70|Homo sapiens ribosomal protein protein.
Length = 70
Score = 53.6 bits (123), Expect = 2e-07
Identities = 32/57 (56%), Positives = 35/57 (61%)
Frame = +1
Query: 79 KTF*LRRGGKTPNRSK*RRTL*NVKFKXSMLKXSXYTLVITDKEKAEKLKQSLPPGL 249
K F L K K ++ NVKFK + YTLVITDKEKAEKLKQSLPPGL
Sbjct: 9 KDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRY-LYTLVITDKEKAEKLKQSLPPGL 64
Score = 51.6 bits (118), Expect = 7e-07
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = +3
Query: 54 MPREIKDIKDFLIKARRKDAKSVKIKKN 137
MPR+I++IKDFL+ ARRKDAKSVKIKKN
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKN 28
>BC000603-1|AAH00603.1| 70|Homo sapiens ribosomal protein L38
protein.
Length = 70
Score = 53.6 bits (123), Expect = 2e-07
Identities = 32/57 (56%), Positives = 35/57 (61%)
Frame = +1
Query: 79 KTF*LRRGGKTPNRSK*RRTL*NVKFKXSMLKXSXYTLVITDKEKAEKLKQSLPPGL 249
K F L K K ++ NVKFK + YTLVITDKEKAEKLKQSLPPGL
Sbjct: 9 KDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRY-LYTLVITDKEKAEKLKQSLPPGL 64
Score = 51.6 bits (118), Expect = 7e-07
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = +3
Query: 54 MPREIKDIKDFLIKARRKDAKSVKIKKN 137
MPR+I++IKDFL+ ARRKDAKSVKIKKN
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKN 28
>AB007185-1|BAA25844.1| 37|Homo sapiens ribosomal protein L38
protein.
Length = 37
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +1
Query: 184 YTLVITDKEKAEKLKQSLPPGL 249
YTLVITDKEKAEKLKQSLPPGL
Sbjct: 10 YTLVITDKEKAEKLKQSLPPGL 31
>BC014655-1|AAH14655.1| 173|Homo sapiens chromosome 19 open reading
frame 10 protein.
Length = 173
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 269 HFTSLTWRPGGKLCLSFSAFSLSV 198
HFT WRP GK L F+ F V
Sbjct: 89 HFTCTIWRPQGKSYLYFTQFKAEV 112
>BC010129-1|AAH10129.1| 173|Homo sapiens chromosome 19 open reading
frame 10 protein.
Length = 173
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 269 HFTSLTWRPGGKLCLSFSAFSLSV 198
HFT WRP GK L F+ F V
Sbjct: 89 HFTCTIWRPQGKSYLYFTQFKAEV 112
>BC003639-1|AAH03639.2| 168|Homo sapiens C19orf10 protein protein.
Length = 168
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 269 HFTSLTWRPGGKLCLSFSAFSLSV 198
HFT WRP GK L F+ F V
Sbjct: 84 HFTCTIWRPQGKSYLYFTQFKAEV 107
>AL365374-1|CAB96948.1| 170|Homo sapiens R33729_1 hypothetical
protein protein.
Length = 170
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 269 HFTSLTWRPGGKLCLSFSAFSLSV 198
HFT WRP GK L F+ F V
Sbjct: 86 HFTCTIWRPQGKSYLYFTQFKAEV 109
>AL365373-1|CAB96947.1| 170|Homo sapiens R33729_1 hypothetical
protein protein.
Length = 170
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 269 HFTSLTWRPGGKLCLSFSAFSLSV 198
HFT WRP GK L F+ F V
Sbjct: 86 HFTCTIWRPQGKSYLYFTQFKAEV 109
>AC005594-1|AAC33800.1| 152|Homo sapiens R33729_1, partial CDS
protein.
Length = 152
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 269 HFTSLTWRPGGKLCLSFSAFSLSV 198
HFT WRP GK L F+ F V
Sbjct: 94 HFTCTIWRPQGKSYLYFTQFKAEV 117
>AC005339-1|AAC27824.1| 99|Homo sapiens R33729_1 protein.
Length = 99
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 269 HFTSLTWRPGGKLCLSFSAFSLSV 198
HFT WRP GK L F+ F V
Sbjct: 15 HFTCTIWRPQGKSYLYFTQFKAEV 38
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,786,863
Number of Sequences: 237096
Number of extensions: 463654
Number of successful extensions: 9924
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9924
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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