Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_I18
         (348 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075491-1|AAL68301.1|   70|Drosophila melanogaster RE42506p pro...    53   9e-08
AE013599-14|EAA46007.1|   70|Drosophila melanogaster CG18001-PA ...    53   9e-08

>AY075491-1|AAL68301.1|   70|Drosophila melanogaster RE42506p
           protein.
          Length = 70

 Score = 53.2 bits (122), Expect = 9e-08
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = +3

Query: 54  MPREIKDIKDFLIKARRKDAKSVKIKKNP 140
           MPREIK++KDFL KARR DA++VKIKKNP
Sbjct: 1   MPREIKEVKDFLNKARRSDARAVKIKKNP 29



 Score = 48.0 bits (109), Expect = 3e-06
 Identities = 23/36 (63%), Positives = 27/36 (75%)
 Frame = +1

Query: 145 NVKFKXSMLKXSXYTLVITDKEKAEKLKQSLPPGLQ 252
           N KFK    +   YTLV+ DKEKA+K+KQSLPPGLQ
Sbjct: 31  NTKFKIRCSRF-LYTLVVQDKEKADKIKQSLPPGLQ 65


>AE013599-14|EAA46007.1|   70|Drosophila melanogaster CG18001-PA
           protein.
          Length = 70

 Score = 53.2 bits (122), Expect = 9e-08
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = +3

Query: 54  MPREIKDIKDFLIKARRKDAKSVKIKKNP 140
           MPREIK++KDFL KARR DA++VKIKKNP
Sbjct: 1   MPREIKEVKDFLNKARRSDARAVKIKKNP 29



 Score = 48.0 bits (109), Expect = 3e-06
 Identities = 23/36 (63%), Positives = 27/36 (75%)
 Frame = +1

Query: 145 NVKFKXSMLKXSXYTLVITDKEKAEKLKQSLPPGLQ 252
           N KFK    +   YTLV+ DKEKA+K+KQSLPPGLQ
Sbjct: 31  NTKFKIRCSRF-LYTLVVQDKEKADKIKQSLPPGLQ 65


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,153,221
Number of Sequences: 53049
Number of extensions: 137871
Number of successful extensions: 342
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 342
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)