Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_I10
         (651 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0104 + 18148396-18148642,18148797-18148886,18148972-181490...    28   7.4  
10_08_0928 + 21617977-21618157,21618260-21618378,21618653-216187...    27   9.8  
03_05_0952 + 29103879-29103983,29104103-29104600,29104693-291047...    27   9.8  

>01_05_0104 +
           18148396-18148642,18148797-18148886,18148972-18149072,
           18149174-18149287,18149381-18149462,18149592-18149659,
           18149747-18149806,18149885-18150009,18150663-18150861,
           18150942-18151073,18151152-18151244,18151360-18152244,
           18152339-18152664,18153003-18153341,18153911-18153996,
           18154054-18154139
          Length = 1010

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/68 (23%), Positives = 37/68 (54%)
 Frame = +2

Query: 188 ASLSNKEQTNMQRSLPQNKEALLKSYTTRLKEDVKSMLENFEEIIKLAKVENESQLNRMT 367
           +S++ K+   M ++  +     +++Y T LKE V + L+  ++++    +E ES   +  
Sbjct: 686 SSVNMKKMQKMFQNAAEENVRNIRAYVTELKERV-AKLQYQKQLLVCQVLELESNEGKTN 744

Query: 368 QIEQDTFE 391
            +E+D+ E
Sbjct: 745 DMEEDSEE 752


>10_08_0928 +
           21617977-21618157,21618260-21618378,21618653-21618774,
           21618853-21619049,21619350-21619603,21619779-21619880,
           21619976-21620404,21620611-21621369,21621586-21621771
          Length = 782

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +2

Query: 197 SNKEQTNMQRSLPQNKEALLKSYTTRLKEDVKSMLENFEEIIKLAKVEN 343
           ++KE   MQR L +  E    SY+T   ED++S   +F E +K+    N
Sbjct: 389 TSKEADKMQR-LEKLLELDGMSYSTFTWEDIESATSSFSEALKIGSGSN 436


>03_05_0952 +
           29103879-29103983,29104103-29104600,29104693-29104794,
           29105552-29105898,29105967-29106153,29106242-29106417,
           29106976-29107065,29107066-29107322,29107593-29107687,
           29107801-29107920,29108111-29108230,29108410-29108508,
           29108588-29108689,29108884-29109111
          Length = 841

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +2

Query: 248 ALLKSYTTR-LKEDVKSMLENFEEIIKLAKVENESQLNRMTQIEQDTFE 391
           A+L+ +  R +KEDV+ ML   +EII  A + N  +  +   +EQ TF+
Sbjct: 531 AILRPFLLRRMKEDVEHMLPRKKEIIIYANMTNHQKEIQNHLVEQ-TFD 578


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,508,548
Number of Sequences: 37544
Number of extensions: 201367
Number of successful extensions: 486
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)