Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_I06
         (572 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    24   0.93 
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   3.8  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   6.6  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   6.6  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   6.6  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   8.7  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    21   8.7  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   8.7  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 99  TSENILYSSYESQLKRENQ 155
           +SEN+ Y + ES +K ENQ
Sbjct: 270 SSENLYYVNTESLMKSENQ 288


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +3

Query: 321 HNRLRQT-VALGQITKQPPAANMMEMIWDDELAATAQRWSD 440
           ++ +R T ++ G   ++    N M+ IW+D++  T  RW +
Sbjct: 33  NDNIRNTLISNGDYIEENNMPNGMQ-IWNDKVFITIPRWKN 72


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -1

Query: 383 VSCWGLFGNLSESNSLSETVVCVHNGLF 300
           + C G  GN+    SL++++  +H   F
Sbjct: 12  IVCQGTTGNILRGESLNKSLPILHEWKF 39


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -1

Query: 383 VSCWGLFGNLSESNSLSETVVCVHNGLF 300
           + C G  GN+    SL++++  +H   F
Sbjct: 12  IVCQGTTGNILRGESLNKSLPILHEWKF 39


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -1

Query: 383 VSCWGLFGNLSESNSLSETVVCVHNGLF 300
           + C G  GN+    SL++++  +H   F
Sbjct: 12  IVCQGTTGNILRGESLNKSLPILHEWKF 39


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +3

Query: 99  TSENILYSSYESQLKRENQLKFRVLCINFLIKMIPLVLFVL 221
           T+E  L +     L  +   K  V CI     +IPL+  +L
Sbjct: 198 TTEGFLTTCSFDFLTDDEDTKVFVTCIFIWAYVIPLIFIIL 238


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 410 FIVPNHFHHVSCWGLFGNL 354
           F+VP+ F    C  LFG +
Sbjct: 92  FVVPHQFIKRICSALFGKI 110


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +3

Query: 99  TSENILYSSYESQLKRENQLKFRVLCINFLIKMIPLVLFVL 221
           T+E  L +     L  +   K  V CI     +IPL+  +L
Sbjct: 198 TTEGFLTTCSFDFLTDDEDTKVFVTCIFIWAYVIPLIFIIL 238


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,723
Number of Sequences: 438
Number of extensions: 3430
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)