Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_I03
(411 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 75 1e-13
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 75 1e-13
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 75 1e-13
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 75 1e-13
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 75 1e-13
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 75 1e-13
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 72 9e-13
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 70 3e-12
X04325-1|CAA27856.1| 283|Homo sapiens protein ( Human liver mRN... 29 7.9
BT019329-1|AAV38136.1| 283|Homo sapiens gap junction protein, b... 29 7.9
BC039198-1|AAH39198.1| 283|Homo sapiens GJB1 protein protein. 29 7.9
BC022426-1|AAH22426.1| 283|Homo sapiens gap junction protein, b... 29 7.9
BC002805-1|AAH02805.1| 283|Homo sapiens gap junction protein, b... 29 7.9
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 74.5 bits (175), Expect = 1e-13
Identities = 41/116 (35%), Positives = 59/116 (50%)
Frame = +1
Query: 25 MKAKGQLREYEVIGRKXXXXXXXXXXXXXXXXXXSGIQLSPNLVSGIS*DNLRSSRRPLV 204
MKA G LREY+V+GR ++ + L+ ++
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFV-SQLKKMKKSSG 59
Query: 205 KLSLLRKFQRKAPSRLRILGIWLRYESRSGVHNMYREYRXLSVGGAVTXCYKKFGS 372
++ + K+P R++ GIWLRY+SRSG HNMYREYR L+ GAVT CY+ G+
Sbjct: 60 EIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGA 115
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/42 (52%), Positives = 26/42 (61%)
Frame = +3
Query: 138 IVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFG 263
+VAKSRFWYF+ QLKK KK++GEIV NFG
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFG 79
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 74.5 bits (175), Expect = 1e-13
Identities = 41/116 (35%), Positives = 59/116 (50%)
Frame = +1
Query: 25 MKAKGQLREYEVIGRKXXXXXXXXXXXXXXXXXXSGIQLSPNLVSGIS*DNLRSSRRPLV 204
MKA G LREY+V+GR ++ + L+ ++
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFV-SQLKKMKKSSG 59
Query: 205 KLSLLRKFQRKAPSRLRILGIWLRYESRSGVHNMYREYRXLSVGGAVTXCYKKFGS 372
++ + K+P R++ GIWLRY+SRSG HNMYREYR L+ GAVT CY+ G+
Sbjct: 60 EIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGA 115
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/42 (52%), Positives = 26/42 (61%)
Frame = +3
Query: 138 IVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFG 263
+VAKSRFWYF+ QLKK KK++GEIV NFG
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFG 79
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 74.5 bits (175), Expect = 1e-13
Identities = 41/116 (35%), Positives = 59/116 (50%)
Frame = +1
Query: 25 MKAKGQLREYEVIGRKXXXXXXXXXXXXXXXXXXSGIQLSPNLVSGIS*DNLRSSRRPLV 204
MKA G LREY+V+GR ++ + L+ ++
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFV-SQLKKMKKSSG 59
Query: 205 KLSLLRKFQRKAPSRLRILGIWLRYESRSGVHNMYREYRXLSVGGAVTXCYKKFGS 372
++ + K+P R++ GIWLRY+SRSG HNMYREYR L+ GAVT CY+ G+
Sbjct: 60 EIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGA 115
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/42 (52%), Positives = 26/42 (61%)
Frame = +3
Query: 138 IVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFG 263
+VAKSRFWYF+ QLKK KK++GEIV NFG
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFG 79
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 74.5 bits (175), Expect = 1e-13
Identities = 41/116 (35%), Positives = 59/116 (50%)
Frame = +1
Query: 25 MKAKGQLREYEVIGRKXXXXXXXXXXXXXXXXXXSGIQLSPNLVSGIS*DNLRSSRRPLV 204
MKA G LREY+V+GR ++ + L+ ++
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFV-SQLKKMKKSSG 59
Query: 205 KLSLLRKFQRKAPSRLRILGIWLRYESRSGVHNMYREYRXLSVGGAVTXCYKKFGS 372
++ + K+P R++ GIWLRY+SRSG HNMYREYR L+ GAVT CY+ G+
Sbjct: 60 EIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGA 115
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/42 (52%), Positives = 26/42 (61%)
Frame = +3
Query: 138 IVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFG 263
+VAKSRFWYF+ QLKK KK++GEIV NFG
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFG 79
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 74.5 bits (175), Expect = 1e-13
Identities = 41/116 (35%), Positives = 59/116 (50%)
Frame = +1
Query: 25 MKAKGQLREYEVIGRKXXXXXXXXXXXXXXXXXXSGIQLSPNLVSGIS*DNLRSSRRPLV 204
MKA G LREY+V+GR ++ + L+ ++
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFV-SQLKKMKKSSG 59
Query: 205 KLSLLRKFQRKAPSRLRILGIWLRYESRSGVHNMYREYRXLSVGGAVTXCYKKFGS 372
++ + K+P R++ GIWLRY+SRSG HNMYREYR L+ GAVT CY+ G+
Sbjct: 60 EIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTAAGAVTQCYRDMGA 115
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/42 (52%), Positives = 26/42 (61%)
Frame = +3
Query: 138 IVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFG 263
+VAKSRFWYF+ QLKK KK++GEIV NFG
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFG 79
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 74.5 bits (175), Expect = 1e-13
Identities = 41/116 (35%), Positives = 59/116 (50%)
Frame = +1
Query: 25 MKAKGQLREYEVIGRKXXXXXXXXXXXXXXXXXXSGIQLSPNLVSGIS*DNLRSSRRPLV 204
MKA G LREY+V+GR ++ + L+ ++
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFV-SQLKKMKKSSG 59
Query: 205 KLSLLRKFQRKAPSRLRILGIWLRYESRSGVHNMYREYRXLSVGGAVTXCYKKFGS 372
++ + K+P R++ GIWLRY+SRSG HNMYREYR L+ GAVT CY+ G+
Sbjct: 60 EIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGA 115
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/42 (52%), Positives = 26/42 (61%)
Frame = +3
Query: 138 IVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFG 263
+VAKSRFWYF+ QLKK KK++GEIV NFG
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFG 79
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 71.7 bits (168), Expect = 9e-13
Identities = 40/116 (34%), Positives = 58/116 (50%)
Frame = +1
Query: 25 MKAKGQLREYEVIGRKXXXXXXXXXXXXXXXXXXSGIQLSPNLVSGIS*DNLRSSRRPLV 204
MKA G LREY+V+GR+ ++ + L+ ++
Sbjct: 1 MKASGTLREYKVVGRRLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFV-SQLKKMKKSSG 59
Query: 205 KLSLLRKFQRKAPSRLRILGIWLRYESRSGVHNMYREYRXLSVGGAVTXCYKKFGS 372
+ + K+P R++ GIWLR +SRSG HNMYREYR L+ GAVT CY+ G+
Sbjct: 60 ETVYCGQVFEKSPLRVKNFGIWLRCDSRSGTHNMYREYRDLTTAGAVTQCYRDMGA 115
Score = 45.6 bits (103), Expect = 6e-05
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = +3
Query: 138 IVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFG 263
+VAKSRFWYF+ QLKK KK++GE V NFG
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGETVYCGQVFEKSPLRVKNFG 79
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 70.1 bits (164), Expect = 3e-12
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +1
Query: 214 LLRKFQRKAPSRLRILGIWLRYESRSGVHNMYREYRXLSVGGAVTXCYKKFGS 372
LL + K+P R++ GIWL Y+SRSG HNMYREYR L+ GAVT CY+ G+
Sbjct: 27 LLWQVFEKSPLRVKNFGIWLSYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGA 79
>X04325-1|CAA27856.1| 283|Homo sapiens protein ( Human liver mRNA
for gap junction protein. ).
Length = 283
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 256 FLILMGLFSGISLIETISPVVFLNFLSCLRKYQKR 152
F + M SGI +I ++ VV+L +C R+ Q+R
Sbjct: 190 FTVFMLAASGICIILNVAEVVYLIIRACARRAQRR 224
>BT019329-1|AAV38136.1| 283|Homo sapiens gap junction protein, beta
1, 32kDa (connexin 32, Charcot-Marie-Tooth neuropath
protein.
Length = 283
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 256 FLILMGLFSGISLIETISPVVFLNFLSCLRKYQKR 152
F + M SGI +I ++ VV+L +C R+ Q+R
Sbjct: 190 FTVFMLAASGICIILNVAEVVYLIIRACARRAQRR 224
>BC039198-1|AAH39198.1| 283|Homo sapiens GJB1 protein protein.
Length = 283
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 256 FLILMGLFSGISLIETISPVVFLNFLSCLRKYQKR 152
F + M SGI +I ++ VV+L +C R+ Q+R
Sbjct: 190 FTVFMLAASGICIILNVAEVVYLIIRACARRAQRR 224
>BC022426-1|AAH22426.1| 283|Homo sapiens gap junction protein, beta
1, 32kDa protein.
Length = 283
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 256 FLILMGLFSGISLIETISPVVFLNFLSCLRKYQKR 152
F + M SGI +I ++ VV+L +C R+ Q+R
Sbjct: 190 FTVFMLAASGICIILNVAEVVYLIIRACARRAQRR 224
>BC002805-1|AAH02805.1| 283|Homo sapiens gap junction protein, beta
1, 32kDa protein.
Length = 283
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 256 FLILMGLFSGISLIETISPVVFLNFLSCLRKYQKR 152
F + M SGI +I ++ VV+L +C R+ Q+R
Sbjct: 190 FTVFMLAASGICIILNVAEVVYLIIRACARRAQRR 224
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,726,122
Number of Sequences: 237096
Number of extensions: 991317
Number of successful extensions: 5370
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5370
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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