Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_H12
         (613 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024441-1|ABC86503.1|  199|Drosophila melanogaster IP01865p pro...    30   2.8  
AE013599-3449|AAO41344.1|  202|Drosophila melanogaster CG13517-P...    30   2.8  
AE014297-2064|AAF55213.2|  636|Drosophila melanogaster CG33207-P...    29   3.7  
AB081475-1|BAC06341.1|  636|Drosophila melanogaster transmembran...    29   3.7  
BT021206-1|AAX33354.1|  252|Drosophila melanogaster SD28167p pro...    28   8.6  
AY075422-1|AAL68238.1| 1674|Drosophila melanogaster LD43328p pro...    28   8.6  
AE014298-1329|AAF46491.3| 1367|Drosophila melanogaster CG32705-P...    28   8.6  
AE013599-760|AAF59009.3| 1629|Drosophila melanogaster CG8213-PA ...    28   8.6  

>BT024441-1|ABC86503.1|  199|Drosophila melanogaster IP01865p
           protein.
          Length = 199

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
 Frame = +1

Query: 202 GGRRRANKGFRGAGRVDSGRTEESTAPASTLGFGQMRSRKCKSSTDITNTLPNSRGRSHG 381
           GG+ R   G+     +D  + E+   P +  G+G  R R  + S D  N   N  G+   
Sbjct: 51  GGQGRQGNGYEYGYGMDHDQEEQDRNPGNRGGYGNRRQRGLRQS-DGRNHTSNDGGQCVA 109

Query: 382 PALFRRQ---FGNGWTSPKRC*WTPSRLLRTR 468
              F       GNG    ++  +  ++ LR R
Sbjct: 110 QCFFEEMNMVDGNGMPDRRKVSYLLTKDLRDR 141


>AE013599-3449|AAO41344.1|  202|Drosophila melanogaster CG13517-PB,
           isoform B protein.
          Length = 202

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
 Frame = +1

Query: 202 GGRRRANKGFRGAGRVDSGRTEESTAPASTLGFGQMRSRKCKSSTDITNTLPNSRGRSHG 381
           GG+ R   G+     +D  + E+   P +  G+G  R R  + S D  N   N  G+   
Sbjct: 54  GGQGRQGNGYEYGYGMDHDQEEQDRNPGNRGGYGNRRQRGLRQS-DGRNHTSNDGGQCVA 112

Query: 382 PALFRRQ---FGNGWTSPKRC*WTPSRLLRTR 468
              F       GNG    ++  +  ++ LR R
Sbjct: 113 QCFFEEMNMVDGNGMPDRRKVSYLLTKDLRDR 144


>AE014297-2064|AAF55213.2|  636|Drosophila melanogaster CG33207-PB,
           isoform B protein.
          Length = 636

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -3

Query: 527 HDEAVSDSLAVAHQLAQFLHRVRNRRLGVHQHRFGEVHPFP 405
           +  +V+  L  A   A+   RV +RRL  HQH+   +H  P
Sbjct: 449 YPSSVASGLMAATMRARTQPRVLDRRLAPHQHQHHRIHAAP 489


>AB081475-1|BAC06341.1|  636|Drosophila melanogaster transmembrane
           protein Pxb protein.
          Length = 636

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -3

Query: 527 HDEAVSDSLAVAHQLAQFLHRVRNRRLGVHQHRFGEVHPFP 405
           +  +V+  L  A   A+   RV +RRL  HQH+   +H  P
Sbjct: 449 YPSSVASGLMAATMRARTQPRVLDRRLAPHQHQHHRIHAAP 489


>BT021206-1|AAX33354.1|  252|Drosophila melanogaster SD28167p
           protein.
          Length = 252

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = +2

Query: 377 TARRCSGASSGMDGPHRSGADG---PQVVCYELDEETGRADEPRR 502
           TA    GA+ G  G    GADG    +VV  E +E+    DE RR
Sbjct: 105 TAAAGGGAAGGAAGGAAGGADGSAAEEVVSEEEEEDEDEEDEERR 149


>AY075422-1|AAL68238.1| 1674|Drosophila melanogaster LD43328p
           protein.
          Length = 1674

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 265 EESTAPASTLGFGQMRSRKCKSSTDIT 345
           EE   PA+  G+GQM S   ++ST+ T
Sbjct: 685 EEGNLPATAAGYGQMSSDSYEASTEST 711


>AE014298-1329|AAF46491.3| 1367|Drosophila melanogaster CG32705-PA
           protein.
          Length = 1367

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +2

Query: 248 LIQAVPRSRRPPPQLLDLDKCDRENANHRRTLQIL 352
           L+ A P  RR P +   +DK   +++NHR++L +L
Sbjct: 517 LVMASPVRRRSPIEAT-MDKAPGQDSNHRKSLNLL 550


>AE013599-760|AAF59009.3| 1629|Drosophila melanogaster CG8213-PA
           protein.
          Length = 1629

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 265 EESTAPASTLGFGQMRSRKCKSSTDIT 345
           EE   PA+  G+GQM S   ++ST+ T
Sbjct: 640 EEGNLPATAAGYGQMSSDSYEASTEST 666


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,086,705
Number of Sequences: 53049
Number of extensions: 648324
Number of successful extensions: 2304
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2304
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)