Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_H12
         (613 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr...    33   0.12 
L23649-3|AAA27909.2|  601|Caenorhabditis elegans Tyrosinase prot...    28   4.6  
Z70208-6|CAA94138.1|  183|Caenorhabditis elegans Hypothetical pr...    28   6.0  
U50301-2|AAM29675.1|  362|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z68010-3|CAA92011.1|  558|Caenorhabditis elegans Hypothetical pr...    27   8.0  
Z67756-4|CAA91765.1|  558|Caenorhabditis elegans Hypothetical pr...    27   8.0  
U61952-4|AAK84529.1|  267|Caenorhabditis elegans Hypothetical pr...    27   8.0  
U39999-9|AAY44013.1|  122|Caenorhabditis elegans Hypothetical pr...    27   8.0  
U23449-6|AAC24300.2|  937|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AF005246-1|AAB95119.1|  556|Caenorhabditis elegans voltage-depen...    27   8.0  

>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical
           protein K10D2.3 protein.
          Length = 1425

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = +1

Query: 196 RSGGRRRANK--GFRGAGRVDSGRTEESTAPASTLGFGQMRSRKCKSSTDITNTLP 357
           RSG RRR     G RG    +SGR   S +PA +    Q  SR    +    N +P
Sbjct: 6   RSGSRRRGGALGGGRGGNSQNSGRKRSSNSPADSASSSQKTSRNPSQNRPPMNIVP 61


>L23649-3|AAA27909.2|  601|Caenorhabditis elegans Tyrosinase protein
           1 protein.
          Length = 601

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 100 GDRYCEQRNERCESHCDTVCGWWN 29
           G  +C +R +    +C   CGW N
Sbjct: 535 GQNFCTRRRQWMAENCQATCGWCN 558


>Z70208-6|CAA94138.1|  183|Caenorhabditis elegans Hypothetical
           protein F54B11.6 protein.
          Length = 183

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = +3

Query: 300 WTNAIEKMQIIDGHYKYFAEFARTQSRPGAVPAPVREWMDLTEA 431
           W  A   ++   GH++   +F R +   G  P PV+   + T++
Sbjct: 138 WNTAYCSVECQQGHWQIHRKFCRRKKSNGGAPGPVQPIAEPTQS 181


>U50301-2|AAM29675.1|  362|Caenorhabditis elegans Hypothetical
           protein F20D6.5 protein.
          Length = 362

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = -2

Query: 189 LHIGSDTF--LHNSSSKAYSFCRKSSTEH 109
           L IG DTF  LHN+   AY+F +K S ++
Sbjct: 62  LFIGDDTFCKLHNTEVDAYTFLQKFSDKN 90


>Z68010-3|CAA92011.1|  558|Caenorhabditis elegans Hypothetical
           protein R07A4.1 protein.
          Length = 558

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 272 RRPPPQLLDLDKCDRENANHR 334
           RR  P L+D + CD EN NH+
Sbjct: 499 RRNMPILIDQNCCDEENHNHK 519


>Z67756-4|CAA91765.1|  558|Caenorhabditis elegans Hypothetical
           protein R07A4.1 protein.
          Length = 558

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 272 RRPPPQLLDLDKCDRENANHR 334
           RR  P L+D + CD EN NH+
Sbjct: 499 RRNMPILIDQNCCDEENHNHK 519


>U61952-4|AAK84529.1|  267|Caenorhabditis elegans Hypothetical
           protein F42A9.7 protein.
          Length = 267

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 14/60 (23%), Positives = 29/60 (48%)
 Frame = +1

Query: 196 RSGGRRRANKGFRGAGRVDSGRTEESTAPASTLGFGQMRSRKCKSSTDITNTLPNSRGRS 375
           R+G  R++++  + +    SGR+ +S+    T G    +S + + S      + N +G S
Sbjct: 50  RNGRSRKSSRSGKSSRSSKSGRSSKSSNSTKTTGSKSSKSSRSQRSNKSNKMVTNPKGFS 109


>U39999-9|AAY44013.1|  122|Caenorhabditis elegans Hypothetical
           protein F41G3.21 protein.
          Length = 122

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -2

Query: 249 NSSSATKAFVSSTSPPRSDCLHIGSDTFLHNSSSKAYSFCRKS 121
           NSSS+T   VSST+   S C+ + +     +  ++  S+C  S
Sbjct: 60  NSSSSTATSVSSTTSSSSTCVDLTNPRTGTSDCTRLASYCTNS 102


>U23449-6|AAC24300.2|  937|Caenorhabditis elegans Hypothetical
           protein K06A1.6 protein.
          Length = 937

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +2

Query: 383 RRCSGASSGMDGPHRSGADGPQVVCYELDEE 475
           ++ SGA+ GMDG  R+G+   ++VC E  ++
Sbjct: 54  QQLSGAADGMDGSSRAGSQ--EIVCDEFTKK 82


>AF005246-1|AAB95119.1|  556|Caenorhabditis elegans
           voltage-dependent potassium channelalpha subunit
           protein.
          Length = 556

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 272 RRPPPQLLDLDKCDRENANHR 334
           RR  P L+D + CD EN NH+
Sbjct: 497 RRNMPILIDQNCCDEENHNHK 517


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,218,579
Number of Sequences: 27780
Number of extensions: 305022
Number of successful extensions: 966
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)