Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_H12
         (613 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    24   1.0  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   1.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   1.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   1.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.4  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    21   7.2  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    21   7.2  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   7.2  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   9.5  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    21   9.5  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 413 PFPNWRRNSAG 381
           P+PNW +N AG
Sbjct: 111 PYPNWAQNKAG 121


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 547 MCALCRCPRIN*FYDIY 597
           MCALC  P +  + DIY
Sbjct: 218 MCALCEKPEVCDYPDIY 234


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 547 MCALCRCPRIN*FYDIY 597
           MCALC  P +  + DIY
Sbjct: 218 MCALCEKPEVCDYPDIY 234


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 547 MCALCRCPRIN*FYDIY 597
           MCALC  P +  + DIY
Sbjct: 218 MCALCEKPEVCDYPDIY 234


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 285 LNSWIWTNAIEK 320
           +N+W+WT  IE+
Sbjct: 69  VNNWLWTPFIER 80


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 275 RPPPQLLDLDKCDRENANHRRTLQILCRIRED 370
           R PP++     C R  A H + L+   +++ED
Sbjct: 479 RCPPEIHKSCICVRFIAEHTKMLEDSTKVKED 510


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 275 RPPPQLLDLDKCDRENANHRRTLQILCRIRED 370
           R PP++     C R  A H + L+   +++ED
Sbjct: 479 RCPPEIHKSCICVRFIAEHTKMLEDSTKVKED 510


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = +2

Query: 293 LDLDKCDRENANHRRTLQ 346
           +D D+CDR++ + R+ ++
Sbjct: 1   VDKDECDRKSLSQRKIIR 18


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -3

Query: 422 EVHPFPNWRRN 390
           +++P+PNW  N
Sbjct: 91  KLNPYPNWEMN 101


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 140 YALEDELWRNVSDPMWRQSDL 202
           YA+ +E WR V+D +    D+
Sbjct: 15  YAILNEAWRLVADGILNAKDV 35


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,393
Number of Sequences: 438
Number of extensions: 3658
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)