Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_H03
         (519 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92803-7|CAB07244.1|  445|Caenorhabditis elegans Hypothetical pr...    76   2e-14
U21317-5|AAA62526.2|  895|Caenorhabditis elegans Hypothetical pr...    28   3.5  
U00035-6|AAA50647.1|  315|Caenorhabditis elegans Hypothetical pr...    28   4.6  
AM231686-1|CAJ77755.1|  315|Caenorhabditis elegans GDP-4-keto-6-...    28   4.6  
Z68879-1|CAA93081.1|  850|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>Z92803-7|CAB07244.1|  445|Caenorhabditis elegans Hypothetical
           protein K01G5.5 protein.
          Length = 445

 Score = 75.8 bits (178), Expect = 2e-14
 Identities = 37/79 (46%), Positives = 46/79 (58%)
 Frame = +1

Query: 145 DGVSLGAFQTIGDFKIEPSESVKKLDTAYWPLLLKNFDRLNVRTNHYTPLPFGNSPFKTP 324
           +G  L   Q  G F++  S    KLD + WPLLLKN+D+LNVRTNHYTP   G SP K  
Sbjct: 11  EGDDLAEAQQKGSFQLPSSNETAKLDASQWPLLLKNYDKLNVRTNHYTPHVEGVSPLKRD 70

Query: 325 HL*LRQSGFINVDXRATPA 381
                 SGF N+D  + P+
Sbjct: 71  IKNYISSGFFNLDKPSNPS 89



 Score = 48.8 bits (111), Expect = 2e-06
 Identities = 23/37 (62%), Positives = 27/37 (72%)
 Frame = +3

Query: 369 SNPSSHKVXSWIKRXLKSKKLVIPGPXDPKVTGWLIV 479
           SNPSSH+V SWIKR L+ +K    G  DPKV+G LIV
Sbjct: 86  SNPSSHEVVSWIKRILRCEKTGHSGTLDPKVSGCLIV 122


>U21317-5|AAA62526.2|  895|Caenorhabditis elegans Hypothetical
           protein B0495.7 protein.
          Length = 895

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 138 KQGWCFVGSFSDDWRLQNRTFGEREEAGHRLLAFVVEKLRS 260
           K GW +   F ++WR++    G  + AG  +LA V   L+S
Sbjct: 317 KNGWFYHTEFDEEWRIEP---GAIQRAGENVLAVVRAILKS 354


>U00035-6|AAA50647.1|  315|Caenorhabditis elegans Hypothetical
           protein R01H2.5 protein.
          Length = 315

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +2

Query: 395 FMDKTXFKIXKTG-HSGPPRSESYGLAY 475
           F DKT + I +T  H GPP   ++G +Y
Sbjct: 112 FPDKTSYPIDETMVHLGPPHDSNFGYSY 139


>AM231686-1|CAJ77755.1|  315|Caenorhabditis elegans
           GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4- reductase
           protein.
          Length = 315

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +2

Query: 395 FMDKTXFKIXKTG-HSGPPRSESYGLAY 475
           F DKT + I +T  H GPP   ++G +Y
Sbjct: 112 FPDKTSYPIDETMVHLGPPHDSNFGYSY 139


>Z68879-1|CAA93081.1|  850|Caenorhabditis elegans Hypothetical
           protein K08F4.1 protein.
          Length = 850

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +2

Query: 254 SIA*MCALTITRRYRSATRLLKRPISD 334
           +I+ +C L + RRYR    +++ P++D
Sbjct: 140 TISSLCELEMERRYRRRQEIMRNPVTD 166


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,693,999
Number of Sequences: 27780
Number of extensions: 231236
Number of successful extensions: 495
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)